diff options
| author | Hilton Chain <hako@ultrarare.space> | 2025-04-20 09:53:57 +0800 |
|---|---|---|
| committer | Hilton Chain <hako@ultrarare.space> | 2025-08-21 19:08:46 +0800 |
| commit | 49d3951dae8cc110d3ebca352f5d305e425e51f4 (patch) | |
| tree | 118f72b04c57b5f8e5ebdaaec26953da2bd8b70b | |
| parent | 5bbf1fb694168b9fd678d9e9afad83c0be39f689 (diff) | |
gnu: python-gseapy: Remove #:cargo-inputs.
* gnu/packages/bioinformatics.scm (python-gseapy)[inputs]: Use ‘cargo-inputs’.
[arguments]: Remove #:cargo-inputs.
* gnu/packages/rust-crates.scm (lookup-cargo-inputs)[python-gseapy]: New
entry.
Change-Id: Iff4233cb4ac47ca65831f90b40017644d4f72349
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 9 | ||||
| -rw-r--r-- | gnu/packages/rust-crates.scm | 78 |
2 files changed, 79 insertions, 8 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 5a3241f736..5b841b7f1f 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -25332,13 +25332,6 @@ CSIv1, CSIv2 and FAI files.") #:install-source? #false #:features '(list "extension-module") #:cargo-test-flags '(list "--features=extension-module") - #:cargo-inputs - `(("rust-csv" ,rust-csv-1) - ("rust-itertools" ,rust-itertools-0.10) - ("rust-pyo3" ,rust-pyo3-0.16) - ("rust-rand" ,rust-rand-0.8) - ("rust-rayon" ,rust-rayon-1) - ("rust-serde" ,rust-serde-1)) #:imported-modules (append %cargo-build-system-modules %pyproject-build-system-modules) @@ -25404,7 +25397,7 @@ exclude = ;; These tests need access to the internet "-k" "not test_enrichr and not test_prerank"))))))) (inputs - (list python-wrapper)) + (cons python-wrapper (cargo-inputs 'python-gseapy))) (native-inputs (list python-pytest python-wheel)) (propagated-inputs diff --git a/gnu/packages/rust-crates.scm b/gnu/packages/rust-crates.scm index 8d6e9c5f38..3b3ff84d1c 100644 --- a/gnu/packages/rust-crates.scm +++ b/gnu/packages/rust-crates.scm @@ -7504,6 +7504,10 @@ (crate-source "py_literal" "0.4.0" "1qd8j3a9zlpq6rjaxabpc9sacw62dn1cr38p3y4x7fbdsjizfb8h")) +(define rust-pyo3-0.16.6 + (crate-source "pyo3" "0.16.6" + "1jn6nhp9a8i5kfwds6fzy3hzb938qim8bajp8gfkkcn9892c8802")) + (define rust-pyo3-0.19.2 (crate-source "pyo3" "0.19.2" "0f1aqx947mzsrk05zdm9w2702lj5k9s97y9w9lxwkp2avk7sd0g6")) @@ -7517,6 +7521,10 @@ "0wm8z6jgg18z2cgr99wc34mbkffhcnb50igmq5d1ff6ghpyvyy3p" #:snippet '(delete-file-recursively "branding"))) +(define rust-pyo3-build-config-0.16.6 + (crate-source "pyo3-build-config" "0.16.6" + "1hndr61lxc2kw7wnnggps3h08lnsqapwa3lxc0l5ji2rg0wrv0cw")) + (define rust-pyo3-build-config-0.19.2 (crate-source "pyo3-build-config" "0.19.2" "19bb7aqyvr4kmh8b2lnrmcv9251j8yxw7l7xyr77m3s3pk876v07")) @@ -7529,6 +7537,10 @@ (crate-source "pyo3-build-config" "0.23.5" "1yqhw1k466k65rqvy2d4xz2shl0hzkry1xlxinciigzkdvlcpxll")) +(define rust-pyo3-ffi-0.16.6 + (crate-source "pyo3-ffi" "0.16.6" + "0pzpcmndak7y72p4rw494cki1bxh86diiqdzsw14gxammc1jg26a")) + (define rust-pyo3-ffi-0.19.2 (crate-source "pyo3-ffi" "0.19.2" "1nc4696k03ydyiy1f69l3ywknavjzxzag2mscrh2bgkywx1fwg75")) @@ -7541,6 +7553,10 @@ (crate-source "pyo3-ffi" "0.23.5" "13fxvxijl59vilv39akdzwqd1l7fb6c70f53n27irfy0672b9wg9")) +(define rust-pyo3-macros-0.16.6 + (crate-source "pyo3-macros" "0.16.6" + "089z1x8fm7078kyhpjcsaipd6745jf2rp86rpbkppbam5504k1sn")) + (define rust-pyo3-macros-0.19.2 (crate-source "pyo3-macros" "0.19.2" "1lggr5pnpmdj0cznlhw7ykm1qka3wlymwzfxqql6a4vyb6clrsyz")) @@ -7553,6 +7569,10 @@ (crate-source "pyo3-macros" "0.23.5" "1nm9i19aff7zn245v35qb0lbr3cxr19zdgcayq84fg7n509j1hpv")) +(define rust-pyo3-macros-backend-0.16.6 + (crate-source "pyo3-macros-backend" "0.16.6" + "1f0y9vxmyq1cidk544pwg3my30f6xfqfgf42grw4gx4q5pl687v1")) + (define rust-pyo3-macros-backend-0.19.2 (crate-source "pyo3-macros-backend" "0.19.2" "0dlm4pg29hjmlqx15gcy9cmnabvc8ycy60hcvjg8hm62flhw2zcl")) @@ -23253,6 +23273,64 @@ rust-unicode-ident-1.0.18 rust-unindent-0.2.4 rust-vcpkg-0.2.15)) + (python-gseapy => + (list rust-autocfg-1.4.0 + rust-bitflags-2.9.0 + rust-cfg-if-1.0.0 + rust-crossbeam-deque-0.8.6 + rust-crossbeam-epoch-0.9.18 + rust-crossbeam-utils-0.8.21 + rust-csv-1.3.1 + rust-csv-core-0.1.12 + rust-either-1.15.0 + rust-getrandom-0.3.2 + rust-indoc-1.0.9 + rust-itertools-0.14.0 + rust-itoa-1.0.15 + rust-libc-0.2.172 + rust-lock-api-0.4.12 + rust-memchr-2.7.4 + rust-once-cell-1.21.3 + rust-parking-lot-0.12.3 + rust-parking-lot-core-0.9.10 + rust-ppv-lite86-0.2.21 + rust-proc-macro2-1.0.95 + rust-pyo3-0.16.6 + rust-pyo3-build-config-0.16.6 + rust-pyo3-ffi-0.16.6 + rust-pyo3-macros-0.16.6 + rust-pyo3-macros-backend-0.16.6 + rust-quote-1.0.40 + rust-r-efi-5.2.0 + rust-rand-0.9.1 + rust-rand-chacha-0.9.0 + rust-rand-core-0.9.3 + rust-rayon-1.10.0 + rust-rayon-core-1.12.1 + rust-redox-syscall-0.5.11 + rust-ryu-1.0.20 + rust-scopeguard-1.2.0 + rust-serde-1.0.219 + rust-serde-derive-1.0.219 + rust-smallvec-1.15.0 + rust-syn-1.0.109 + rust-syn-2.0.100 + rust-target-lexicon-0.12.16 + rust-unicode-ident-1.0.18 + rust-unindent-0.1.11 + rust-wasi-0.14.2+wasi-0.2.4 + rust-windows-targets-0.52.6 + rust-windows-aarch64-gnullvm-0.52.6 + rust-windows-aarch64-msvc-0.52.6 + rust-windows-i686-gnu-0.52.6 + rust-windows-i686-gnullvm-0.52.6 + rust-windows-i686-msvc-0.52.6 + rust-windows-x86-64-gnu-0.52.6 + rust-windows-x86-64-gnullvm-0.52.6 + rust-windows-x86-64-msvc-0.52.6 + rust-wit-bindgen-rt-0.39.0 + rust-zerocopy-0.8.24 + rust-zerocopy-derive-0.8.24)) (python-rpds-py => (list rust-archery-1.2.1 rust-autocfg-1.4.0 |