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| author | Ricardo Wurmus <rekado@elephly.net> | 2024-05-07 13:06:34 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2024-05-08 12:53:27 +0200 |
| commit | 014cb61aec5b52c543df2bbf2ee4ffeaa2f1264d (patch) | |
| tree | 8f45c8514e6caa9314c604568d3c0c1617e2cbd4 | |
| parent | e5db1eda48e52a192a2d65b1e3e06038fd220342 (diff) | |
gnu: r-trackviewer: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-trackviewer): Update to 1.40.0.
[propagated-inputs]: Remove r-graph and r-rgraphviz; add r-igraph and r-txdbmaker.
Change-Id: I90fbb82ff3261d78d5a34398319032f18068fe6a
| -rw-r--r-- | gnu/packages/bioconductor.scm | 11 |
1 files changed, 5 insertions, 6 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index e506f6f756..b836405552 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -11692,17 +11692,16 @@ tissues. Current functionalities include @end enumerate") (license license:gpl2))) -;; TODO: check javascript (define-public r-trackviewer (package (name "r-trackviewer") - (version "1.38.2") + (version "1.40.0") (source (origin (method url-fetch) (uri (bioconductor-uri "trackViewer" version)) (sha256 (base32 - "1zgxp76ykgn4wk6nnpafjpswcky23jpghzzs68z0hhlzv4cc40s6")) + "01m0jwig3l6dfhd3w5aq4sx2krsipjg5jjxa78kalfrzrm6k05s4")) (snippet '(delete-file "inst/htmlwidgets/lib/d3/d3.v4.min.js")))) (properties `((upstream-name . "trackViewer"))) @@ -11726,20 +11725,20 @@ tissues. Current functionalities include r-genomicalignments r-genomicfeatures r-genomicranges - r-graph r-grimport r-gviz r-htmlwidgets + r-igraph r-interactionset r-iranges r-plotrix - r-rgraphviz r-rhdf5 r-rsamtools r-rtracklayer r-s4vectors r-scales - r-strawr)) + r-strawr + r-txdbmaker)) (native-inputs (list esbuild r-knitr |