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authorRicardo Wurmus <rekado@elephly.net>2024-05-07 12:59:20 +0200
committerRicardo Wurmus <rekado@elephly.net>2024-05-08 12:53:26 +0200
commit04949bab4ad0a4cb2610af666fecb6942a48d5f4 (patch)
treefa4bd0e3efe1069040db4bcb6342526a6e1c8e25
parent3919266295cf1378836d33344e983984bca49210 (diff)
gnu: r-shortread: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-shortread): Update to 1.62.0. [propagated-inputs]: Add r-pwalign. Change-Id: If2d4d238f239f2acda2f8bffc29851dbfa5e6242
-rw-r--r--gnu/packages/bioconductor.scm5
1 files changed, 3 insertions, 2 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 57c0899eb7..68bee6eadf 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -11433,14 +11433,14 @@ methylation array data. Both the 450k and EPIC array are supported.")
(define-public r-shortread
(package
(name "r-shortread")
- (version "1.60.0")
+ (version "1.62.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "ShortRead" version))
(sha256
(base32
- "0fgiszb5qhplppfngpi4s33sx62ff5sdhd6n31a3b6l7fnlvk51m"))))
+ "0x5iqx2k2xs5rwjch0bpcb8pgc0nhb571991yahdr8hsxwbas3jm"))))
(properties `((upstream-name . "ShortRead")))
(build-system r-build-system)
(inputs
@@ -11457,6 +11457,7 @@ methylation array data. Both the 450k and EPIC array are supported.")
r-iranges
r-lattice
r-latticeextra
+ r-pwalign
r-rhtslib
r-rsamtools
r-s4vectors