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| author | Ricardo Wurmus <rekado@elephly.net> | 2024-05-07 12:19:33 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2024-05-08 12:53:14 +0200 |
| commit | 1dd2cce88ff66fb80e26277ff06492fc633aa64c (patch) | |
| tree | 17b6d6e177c78e4848a8ff523693a3bfda457a26 | |
| parent | 092609b36a10031b671f21de60dbd95c7fb3bcc8 (diff) | |
gnu: Add r-alabaster-sce.
* gnu/packages/bioconductor.scm (r-alabaster-sce): New variable.
Change-Id: I8121614d5b93922555b6cb5fd7a05d68980aff20
| -rw-r--r-- | gnu/packages/bioconductor.scm | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 295f067769..236ab05f7d 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -3295,6 +3295,31 @@ interpretation; downstream applications can enrich this metadata with context-specific properties.") (license license:expat))) +(define-public r-alabaster-sce + (package + (name "r-alabaster-sce") + (version "1.4.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "alabaster.sce" version)) + (sha256 + (base32 "1i9nmivsfrd7fbb8njmwihfx4xpj4p3h5bnlj9fvk5308bbj3qcg")))) + (properties `((upstream-name . "alabaster.sce"))) + (build-system r-build-system) + (propagated-inputs (list r-alabaster-base r-alabaster-se r-jsonlite + r-singlecellexperiment)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/alabaster.sce") + (synopsis "Load and save SingleCellExperiment from file") + (description + "This is a package for saving @code{SingleCellExperiment} into file +artifacts, and loading them back into memory. This is a more portable +alternative to serialization of such objects into RDS files. Each artifact is +associated with metadata for further interpretation; downstream applications +can enrich this metadata with context-specific properties.") + (license license:expat))) + (define-public r-alabaster-schemas (package (name "r-alabaster-schemas") |