diff options
| author | Ricardo Wurmus <rekado@elephly.net> | 2024-05-07 12:59:18 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2024-05-08 12:53:26 +0200 |
| commit | d4094eaef405238238883255825c9b06cf98dda7 (patch) | |
| tree | 0de675c6ee44f92d3abba181f6f27916ebbb8851 | |
| parent | 0ddc2665e034440df1ecfe145922d586fce9a3be (diff) | |
gnu: r-screpertoire: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-screpertoire): Update to 2.0.0.
[propagated-inputs]: Remove r-doparallel, r-powertcr, and r-vegan; add r-cubature,
r-evmix, r-ggdendro, r-hash, r-inext, r-quantreg, r-rcpp, r-rjson,
r-s4vectors, r-truncdist, and r-vgam.
Change-Id: I0d2647f9d2cee66503e0d76f4ff913fd5662971c
| -rw-r--r-- | gnu/packages/bioconductor.scm | 18 |
1 files changed, 13 insertions, 5 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 618e95648d..4d4e23e728 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -11163,33 +11163,41 @@ different experiment.") (define-public r-screpertoire (package (name "r-screpertoire") - (version "1.12.0") + (version "2.0.0") (source (origin (method url-fetch) (uri (bioconductor-uri "scRepertoire" version)) (sha256 - (base32 "1wgs8dv5zl82iciy86w5ws1gq8v2piklcifbw7gmbw60kijyr2l1")))) + (base32 "1ifnyfzswisacvxxf041l1snfv1b8x30pjg2pwampg804c56f1wj")))) (properties `((upstream-name . "scRepertoire"))) (build-system r-build-system) (propagated-inputs - (list r-doparallel + (list r-cubature r-dplyr + r-evmix r-ggalluvial + r-ggdendro r-ggplot2 r-ggraph + r-hash r-igraph + r-inext r-plyr - r-powertcr + r-quantreg + r-rcpp r-reshape2 + r-rjson r-rlang + r-s4vectors r-seuratobject r-singlecellexperiment r-stringdist r-stringr r-summarizedexperiment r-tidygraph - r-vegan)) + r-truncdist + r-vgam)) (native-inputs (list r-knitr)) (home-page "https://bioconductor.org/packages/scRepertoire") (synopsis "Toolkit for single-cell immune receptor profiling") |