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| author | Ricardo Wurmus <rekado@elephly.net> | 2025-01-16 22:53:44 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2025-01-20 21:38:01 +0100 |
| commit | def1f7ba661c5896b0e90b0f6d3a6d996306cac8 (patch) | |
| tree | 304abb264141b40417e4f5d2bd8d3e7350a872a6 /gnu/packages/python-xyz.scm | |
| parent | 84119015a33d7f4e7c9ca5c9a187b99a1ee41c54 (diff) | |
gnu: Move python-pysnptools to (gnu packages bioinformatics).
* gnu/packages/python-xyz.scm (python-pysnptools): Move from here...
* gnu/packages/bioinformatics.scm (python-pysnptools): ...to here.
Change-Id: I4dbd9cbe3f2d9a6dd4906be79b78862b39a57c28
Diffstat (limited to 'gnu/packages/python-xyz.scm')
| -rw-r--r-- | gnu/packages/python-xyz.scm | 42 |
1 files changed, 0 insertions, 42 deletions
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 3b1e90621b..1995f113d7 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -10521,48 +10521,6 @@ snippets with input parameters (e.g., the size of an array) and plotting the results.") (license license:gpl3+))) -(define-public python-pysnptools - (package - (name "python-pysnptools") - (version "0.5.14") - (source - (origin - (method url-fetch) - (uri (pypi-uri "pysnptools" version)) - (sha256 - (base32 - "1babnyky5fk93as1ybdvpz9x3x5099gkgscxflngzfswin23mspk")))) - (build-system pyproject-build-system) - ;; Tests require test data from python-bed-reader, which fetches data with - ;; python-pooch. - (arguments (list #:tests? #f)) - (propagated-inputs - (list python-bed-reader - python-cloudpickle - python-h5py - python-more-itertools - python-numpy - python-pandas - python-psutil - python-scipy)) - (native-inputs - (list python-pytest - python-pytest-cov - python-pytest-datadir - python-pytest-doctestplus - python-setuptools - python-sphinx - python-sphinx-rtd-theme - python-wheel)) - (home-page "http://microsoftgenomics.github.io/PySnpTools/") - (synopsis "Library for reading and manipulating genetic data") - (description - "PySnpTools is a library for reading and manipulating genetic data. It -can, for example, efficiently read whole PLINK *.bed/bim/fam files or parts of -those files. It can also efficiently manipulate ranges of integers using set -operators such as union, intersection, and difference.") - (license license:asl2.0))) - (define-public python-pykdtree (package (name "python-pykdtree") |