Merge branch 'master' into gnome-team

Change-Id: I88d3789460d1a89917451d80405d89a2824006ac

1 files changed, 187 insertions, 37 deletions

diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 65c23cb318..6001e7e6eb 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -63,7 +63,7 @@
 ;;; Copyright © 2019, 2020 Alex Griffin <a@ajgrf.com>
 ;;; Copyright © 2019, 2020, 2021, 2022, 2023 Pierre Langlois <pierre.langlois@gmx.com>
 ;;; Copyright © 2019 Jacob MacDonald <jaccarmac@gmail.com>
-;;; Copyright © 2019, 2020, 2021 Giacomo Leidi <goodoldpaul@autistici.org>
+;;; Copyright © 2019-2021, 2023 Giacomo Leidi <goodoldpaul@autistici.org>
 ;;; Copyright © 2019 Wiktor Żelazny <wzelazny@vurv.cz>
 ;;; Copyright © 2019, 2020, 2021, 2022 Tanguy Le Carrour <tanguy@bioneland.org>
 ;;; Copyright © 2019, 2021-2023 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
@@ -139,6 +139,7 @@
 ;;; Copyright © 2023 Dominik Delgado Steuter <d@delgado.nrw>
 ;;; Copyright © 2023 Ivan Vilata-i-Balaguer <ivan@selidor.net>
 ;;; Copyright © 2023 Ontje Lünsdorf <ontje.luensdorf@dlr.de>
+;;; Copyright © 2023 gemmaro <gemmaro.dev@gmail.com>
 ;;; Copyright © 2023 Parnikkapore <poomklao@yahoo.com>
 ;;; Copyright © 2023 Foundation Devices, Inc. <hello@foundationdevices.com>
 ;;; Copyright © c4droid <c4droid@foxmail.com>
@@ -4881,6 +4882,30 @@ between Julian dates and Gregorian dates.")
 compare, diff, and patch JSON and JSON-like structures in Python.")
    (license license:expat)))
 
+(define-public python-ddlparse
+  (package
+    (name "python-ddlparse")
+    (version "1.10.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "ddlparse" version))
+       (sha256
+        (base32 "1nh8m6rxslwk05daxshxmgk41qfp18yynydba49b13l4m8dnh634"))))
+    (build-system pyproject-build-system)
+    (native-inputs
+     (list python-codecov
+           python-coveralls
+           python-pytest
+           python-pytest-cov
+           python-tox))
+    (propagated-inputs (list python-pyparsing))
+    (home-page "https://github.com/shinichi-takii/ddlparse")
+    (synopsis "Parses and converts DDL to BigQuery JSON schema")
+    (description "This package provides @{ddlparse}, a Python library to parse
+and convert DDL to BigQuery JSON schema.")
+    (license license:bsd-3)))
+
 (define-public python-jsonschema
   (package
     (name "python-jsonschema")
@@ -5819,14 +5844,17 @@ flexibility and power of the Python language.")
 (define-public python-dm-tree
   (package
     (name "python-dm-tree")
-    (version "0.1.7")
+    (version "0.1.8")
     (source (origin
               (method url-fetch)
               (uri (pypi-uri "dm-tree" version))
               (sha256
-               (base32 "0apxfxgmqh22qpk92zmmf3acqkavhwxz78lnwz026a5rlnncizih"))))
-    (build-system python-build-system)
-    (inputs (list pybind11 abseil-cpp python))
+               (base32 "0c4l9gpaqd7j34qwnpjibv53j9sm0nyl0wcy8dvh76772jxspjhg"))))
+    (build-system pyproject-build-system)
+    ;; We link the static abseil libraries here to avoid problems in
+    ;; downstream libraries using potentially different variants of
+    ;; abseil-cpp.  This is also what's done in the upstream CMake build.
+    (inputs (list pybind11 static-abseil-cpp python))
     (propagated-inputs (list python-wheel
                              python-absl-py
                              python-attrs
@@ -5867,13 +5895,15 @@ flexibility and power of the Python language.")
                       (string-append "-Wl," "-rpath=" python "/lib")
                       "-fno-semantic-interposition"
                       "build/temp/tree/tree.o"
+                      "-Wl,--whole-archive"
                       "-L" (string-append python "/lib")
-                      "-L" (string-append abseil-cpp "/lib")
-                      "-l" "absl_int128"
-                      "-l" "absl_raw_hash_set"
-                      "-l" "absl_raw_logging_internal"
-                      "-l" "absl_strings"
-                      "-l" "absl_throw_delegate"
+                      (string-append abseil-cpp "/lib/libabsl_int128.a")
+                      (string-append abseil-cpp "/lib/libabsl_raw_hash_set.a")
+                      (string-append abseil-cpp "/lib/libabsl_raw_logging_internal.a")
+                      (string-append abseil-cpp "/lib/libabsl_strings.a")
+                      (string-append abseil-cpp "/lib/libabsl_strings_internal.a")
+                      (string-append abseil-cpp "/lib/libabsl_throw_delegate.a")
+                      "-Wl,--no-whole-archive"
                       "-o" "build/lib/tree/_tree.so")))))))
     (home-page "https://github.com/deepmind/tree")
     (synopsis "Work with nested data structures in Python")
@@ -13467,6 +13497,24 @@ provided that can be used to do various manipulations with LilyPond files.")
 should be stored on various operating systems.")
     (license license:expat)))
 
+(define-public python-google-pasta
+  (package
+    (name "python-google-pasta")
+    (version "0.2.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "google-pasta" version))
+       (sha256
+        (base32 "0vm1r1jlaiagj0l9yf7j6zn9w3733dr2169911c0svgrr3gwiwn9"))))
+    (build-system pyproject-build-system)
+    (propagated-inputs (list python-six))
+    (home-page "https://github.com/google/pasta")
+    (synopsis "pasta is an AST-based Python refactoring library")
+    (description "This package provides \"pasta\", an AST-based Python
+refactoring library.")
+    (license license:asl2.0)))
+
 (define-public python-gorilla
   (package
     (name "python-gorilla")
@@ -13745,22 +13793,6 @@ similar to the Python standard library's @code{json} module.")
 includes dependency resolution logic.")
     (license license:isc)))
 
-;;; This older version is required by ansible-core.
-(define-public python-resolvelib-0.5
-  (package/inherit python-resolvelib
-    (name "python-resolvelib")
-    (version "0.5.4")
-    (source
-     (origin
-       (method git-fetch)
-       (uri (git-reference
-             (url "https://github.com/sarugaku/resolvelib")
-             (commit version)))
-       (file-name (git-file-name name version))
-       (sha256
-        (base32
-         "0697y330sqhiclk25v151qxg7aixzpj434lbg5qib0qlna5zg9la"))))))
-
 (define-public python-commonmark
   (package
     (name "python-commonmark")
@@ -24523,6 +24555,102 @@ in Python.  You can simply type pybtex instead of bibtex.")
 time-based (TOTP) passwords.")
     (license license:expat)))
 
+(define-public python-online-judge-api-client
+  (package
+    (name "python-online-judge-api-client")
+    (version "10.10.1")
+    ;; Source distributions are not uploaded to PyPI.
+    ;; https://pypi.org/project/online-judge-api-client/10.10.1/#files
+    (source (origin
+              (method git-fetch)
+              (uri (git-reference
+                    (url "https://github.com/online-judge-tools/api-client")
+                    (commit (string-append "v" version))))
+              (file-name (git-file-name name version))
+              (sha256
+               (base32
+                "0yjqhh44va5nawd9rpqcjyf0g7rjlkvn7s90fmwmwjyqvy6lhjiz"))
+              (patches (search-patches
+                        "python-online-judge-api-client-tests.patch"))))
+    (build-system python-build-system)
+    (arguments
+     (list #:phases #~(modify-phases %standard-phases
+                        ;; These tests require network connections
+                        (add-after 'unpack 'remove-failing-test
+                          (lambda _
+                            (for-each delete-file
+                                      '("tests/get_contest_atcoder.py"
+                                        "tests/get_contest_atcoder_problems.py"
+                                        "tests/get_contest_codechef.py"
+                                        "tests/get_contest_codeforces.py"
+                                        "tests/get_contest_yukicoder.py"
+                                        "tests/get_problem_anarchygolf.py"
+                                        "tests/get_problem_aoj.py"
+                                        "tests/get_problem_atcoder.py"
+                                        "tests/get_problem_codechef.py"
+                                        "tests/get_problem_codeforces.py"
+                                        "tests/get_problem_csacademy.py"
+                                        "tests/get_problem_facebook.py"
+                                        "tests/get_problem_hackerrank.py"
+                                        "tests/get_problem_kattis.py"
+                                        "tests/get_problem_library_checker.py"
+                                        "tests/get_problem_poj.py"
+                                        "tests/get_problem_topcoder.py"
+                                        "tests/get_problem_toph.py"
+                                        "tests/get_problem_yukicoder.py"
+                                        "tests/login_service.py")) #t)))))
+    (propagated-inputs (list python-appdirs
+                             python-beautifulsoup4
+                             python-colorlog
+                             python-lxml
+                             python-requests
+                             python-toml
+                             python-jsonschema))
+    (home-page "https://github.com/online-judge-tools/api-client")
+    (synopsis "API client for various online judges")
+    (description
+     "This is an API client for various online judges, used as the backend
+library of @code{oj} command.  You can use the Python
+library (@code{onlinejudge} module) and the command-line
+interface (@command{oj-api} command) which talks JSON compatible with
+jmerle/competitive-companion.")
+    (license license:expat)))
+
+(define-public online-judge-tools
+  (package
+    (name "online-judge-tools")
+    (version "11.5.1")
+    ;; Source distributions are not uploaded to PyPI.
+    ;; https://pypi.org/project/online-judge-tools/11.5.1/#files
+    (source (origin
+              (method git-fetch)
+              (uri (git-reference
+                    (url "https://github.com/online-judge-tools/oj")
+                    (commit (string-append "v" version))))
+              (file-name (git-file-name name version))
+              (sha256
+               (base32
+                "0zkzmmjgjb6lyrzq1ip54cpnp7al9a7mcyjyi5vx58bvnx3q0c6m"))
+              (patches (search-patches "online-judge-tools.patch"))))
+    (build-system python-build-system)
+    (arguments
+     (list #:phases #~(modify-phases %standard-phases
+                        ;; These tests require network connections
+                        (add-after 'unpack 'remove-failing-test
+                          (lambda _
+                            (delete-file "tests/command_version.py") #t)))))
+    (inputs (list time))
+    (propagated-inputs (list python-online-judge-api-client python-colorama
+                             python-requests))
+    (home-page "https://github.com/online-judge-tools/oj")
+    (synopsis "Command to help solving problems on various online judges")
+    (description
+     "@command{oj} is a command line tool to help solving problems on
+various online judges.  This command automates downloading sample
+cases, generating additional test cases, testing for your code, and
+submitting it.")
+    (license license:expat)))
+
 (define-public python-parso
   (package
     (name "python-parso")
@@ -28912,7 +29040,7 @@ accessor layer.")
 (define-public pyzo
   (package
     (name "pyzo")
-    (version "4.12.8")
+    (version "4.13.3")
     (source
      (origin
        (method git-fetch)
@@ -28922,7 +29050,7 @@ accessor layer.")
        (file-name (git-file-name name version))
        (sha256
         (base32
-         "036snpv6j63bv9z9mbq317qb43zwsj1m8vljra3c0kiakahp7cc3"))))
+         "1m0mrp20wjvy804214f4zzlbaqrakam0g3qr562yn2mjcgfba554"))))
     (build-system python-build-system)
     (arguments
      `(#:phases
@@ -29883,26 +30011,48 @@ applications with variable CPU loads).")
 (define-public python-versioneer
   (package
     (name "python-versioneer")
-    (version "0.21")
+    (version "0.29")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "versioneer" version))
        (sha256
         (base32
-         "084fglxafbzvf1vbkzfajvs9qwnvjwwn8pxql9nrlpyipv5xpwk4"))
+         "0cap4cjckxp9mlkprqayfs77k3pn5iwpr2riacdxc4bjhnwq7cjs"))
        (patches (search-patches "python-versioneer-guix-support.patch"))))
-    (build-system python-build-system)
-    (home-page
-     "https://github.com/python-versioneer/python-versioneer")
-    (synopsis
-     "Version-string management for VCS-controlled trees")
+    (build-system pyproject-build-system)
+    (arguments
+     (list
+      #:phases
+      #~(modify-phases %standard-phases
+          (replace 'check
+            (lambda* (#:key tests? #:allow-other-keys)
+              (when tests?
+                ;; Taken from tox.ini.
+                (invoke "python" "setup.py" "make_versioneer")
+                (invoke "python" "-m" "unittest" "discover" "test")
+                (invoke "python" "test/git/test_git.py" "-v")
+                ;; Some invocation tests require the network.
+                ;;(invoke "python" "test/git/test_invocations.py" "-v")
+                (invoke "python" "setup.py" "make_long_version_py_git")
+                (invoke "pyflakes" "setup.py" "versioneer.py" "git_version.py")
+                (invoke "python" "test/run_pyflakes_src.py")
+                (invoke "pyflakes" "test")
+                (invoke "flake8" "git_version.py" "versioneer.py")
+                (invoke "pycodestyle" "--max-line-length=88"
+                        "git_version.py" "versioneer.py")))))))
+    (native-inputs
+     (list git python-flake8 python-pycodestyle python-pyflakes))
+    (propagated-inputs
+     (list python-tomli))
+    (home-page "https://github.com/python-versioneer/python-versioneer")
+    (synopsis "Version-string management for VCS-controlled trees")
     (description
      "@code{versioneer} is a tool for managing a recorded version number in
 distutils-based python projects.  The goal is to remove the tedious and
 error-prone \"update the embedded version string\" step from your release
 process.")
-    (license license:public-domain)))
+    (license license:unlicense)))
 
 (define-public python-gamera
   (package