diff options
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a49d8455ce..0014b31d32 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -7646,6 +7646,34 @@ identify the corresponding gene and CDR3 details. TRUST4 supports both single-e and paired-end bulk or single-cell sequencing data with any read length.") (license license:gpl3))) +(define-public python-airr + (package + (name "python-airr") + (version "1.5.1") + (home-page "https://pypi.org/project/airr/") + (source + (origin + (method url-fetch) + (uri (pypi-uri "airr" version)) + (sha256 + (base32 + "0jbigfdwa23xv5riw0ljdfq2qwg1b2fav2kfi81zxd1g1jprxy3i")))) + (build-system pyproject-build-system) + (propagated-inputs + (list python-pandas + python-pyyaml + python-yamlordereddictloader)) + (native-inputs + (list python-jsondiff + python-setuptools + python-wheel)) + (synopsis "Data Representation Standard library for antibody and TCR sequences") + (description "Python-airr provides a library by the AIRR community to for +describing, reporting, storing, and sharing adaptive immune receptor +repertoire (AIRR) data, such as sequences of antibodies and T cell +receptors (TCRs).") + (license license:cc-by4.0))) + (define-public diamond (package (name "diamond") |