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| -rw-r--r-- | gnu/packages/bioinformatics.scm | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 7dbebcf3da..04af72bc95 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -2110,6 +2110,29 @@ matplotlib Axes objects, making them easy to style and incorporate into multi-panel figures.") (license license:expat))) +(define-public python-parabam + (package + (name "python-parabam") + (version "3.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "parabam" version)) + (sha256 + (base32 "1cy9q3gzdawi1kilycpd7waymjmrwsg8czwycfp13g301ir9xyp3")) + (modules '((guix build utils))) + (snippet + '(substitute* "setup.py" + (("'argparse',") ""))))) + (build-system pyproject-build-system) + (propagated-inputs (list python-numpy python-pysam)) + (home-page "https://github.com/cancerit/parabam") + (synopsis "Parallel BAM File Analysis") + (description "Parabam is a tool for processing sequencing files in +parallel. It uses Python's native multiprocessing framework to apply a user +defined rule on an input file.") + (license license:gpl3))) + (define-public python-peaks2utr (package (name "python-peaks2utr") |