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| -rw-r--r-- | gnu/packages/bioconductor.scm | 32 |
1 files changed, 32 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 236ab05f7d..08b365f0fe 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -3341,6 +3341,38 @@ packages. No computation should be performed by this package, as that is handled by @code{alabaster.base}.") (license license:expat))) +(define-public r-alabaster-se + (package + (name "r-alabaster-se") + (version "1.4.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "alabaster.se" version)) + (sha256 + (base32 "15jggzbkl2v1jlng3bsqyf8sfvihn9amsbfgdygv04zh0kbx4i46")))) + (properties `((upstream-name . "alabaster.se"))) + (build-system r-build-system) + (propagated-inputs (list r-alabaster-base + r-alabaster-matrix + r-alabaster-ranges + r-biocgenerics + r-genomicranges + r-iranges + r-jsonlite + r-s4vectors + r-summarizedexperiment)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/alabaster.se") + (synopsis "Load and save SummarizedExperiments from file") + (description + "This is a package for saving @code{SummarizedExperiments} into file +artifacts, and loading them back into memory. This is a more portable +alternative to serialization of such objects into RDS files. Each artifact is +associated with metadata for further interpretation; downstream applications +can enrich this metadata with context-specific properties.") + (license license:expat))) + (define-public r-amountain (package (name "r-amountain") |