diff options
| -rw-r--r-- | gnu/packages/bioconductor.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 9e29804018..bafea5a1d3 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -19979,6 +19979,32 @@ UCell can be applied to any single-cell data matrix, and includes functions to directly interact with SingleCellExperiment and Seurat objects.") (license license:gpl3))) +(define-public r-ucsc-utils + (package + (name "r-ucsc-utils") + (version "1.0.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "UCSC.utils" version)) + (sha256 + (base32 "0w9f5xd6ryniapbpcrpczn8wimph2154w45cvdgqfa3dv5qy379l")))) + (properties `((upstream-name . "UCSC.utils"))) + (build-system r-build-system) + (propagated-inputs (list r-httr r-jsonlite r-s4vectors)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/UCSC.utils") + (synopsis + "Low-level utilities to retrieve data from the UCSC Genome Browser") + (description + "This package provides a set of low-level utilities to retrieve data from the +UCSC Genome Browser. Most functions in the package access the data via the UCSC +REST API but some of them query the UCSC @code{MySQL} server directly. Note +that the primary purpose of the package is to support higher-level +functionalities implemented in downstream packages like @code{GenomeInfoDb} or +txdbmaker.") + (license license:artistic2.0))) + (define-public r-unifiedwmwqpcr (package (name "r-unifiedwmwqpcr") |