diff options
Diffstat (limited to 'gnu/packages/graph.scm')
| -rw-r--r-- | gnu/packages/graph.scm | 86 |
1 files changed, 83 insertions, 3 deletions
diff --git a/gnu/packages/graph.scm b/gnu/packages/graph.scm index d2e4c875a1..c9486935ae 100644 --- a/gnu/packages/graph.scm +++ b/gnu/packages/graph.scm @@ -6,6 +6,8 @@ ;;; Copyright © 2019 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2020 Alexander Krotov <krotov@iitp.ru> ;;; Copyright © 2020 Pierre Langlois <pierre.langlos@gmx.com> +;;; Copyright © 2021 Vinicius Monego <monego@posteo.net> +;;; Copyright © 2021 Alexandre Hannud Abdo <abdo@member.fsf.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -37,13 +39,18 @@ #:use-module (gnu packages autotools) #:use-module (gnu packages bioconductor) #:use-module (gnu packages bioinformatics) + #:use-module (gnu packages boost) #:use-module (gnu packages check) #:use-module (gnu packages compression) #:use-module (gnu packages cran) + #:use-module (gnu packages datastructures) #:use-module (gnu packages gd) + #:use-module (gnu packages graphics) #:use-module (gnu packages graphviz) + #:use-module (gnu packages gtk) #:use-module (gnu packages maths) #:use-module (gnu packages multiprecision) + #:use-module (gnu packages ncurses) #:use-module (gnu packages pkg-config) #:use-module (gnu packages python) #:use-module (gnu packages python-science) @@ -225,12 +232,30 @@ subplots, multiple-axes, polar charts, and bubble charts. ") (arguments '(#:tests? #f)))) ; The tests are not distributed in the release -(define-public python2-plotly - (package-with-python2 python-plotly-2.4.1)) - (define-public python-louvain (package (name "python-louvain") + (version "0.15") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-louvain" version)) + (sha256 + (base32 "1sqp97fwh4asx0jr72x8hil8z8fcg2xq92jklmh2m599pvgnx19a")))) + (build-system python-build-system) + (propagated-inputs + `(("python-networkx" ,python-networkx) + ("python-numpy" ,python-numpy))) + (home-page "https://github.com/taynaud/python-louvain") + (synopsis "Louvain algorithm for community detection") + (description + "This package provides a pure Python implementation of the Louvain +algorithm for community detection in large networks.") + (license license:bsd-3))) + +(define-public python-louvain-0.6 + (package + (name "python-louvain") (version "0.6.1") ;; The tarball on Pypi does not include the tests. (source (origin @@ -510,3 +535,58 @@ MSCs need not be complicated to create or use. Mscgen aims to provide a simple text language that is clear to create, edit and understand, which can also be transformed into common image formats for display or printing.") (license license:gpl2+))) + +(define-public python-graph-tool + (package + (name "python-graph-tool") + (version "2.43") + (source (origin + (method url-fetch) + (uri (string-append + "https://downloads.skewed.de/graph-tool/graph-tool-" + version ".tar.bz2")) + (sha256 + (base32 + "0v58in4rwk9fhjarjw6xfxpx5zz2z13sy3yvd14b5kr0884yw6sz")))) + (build-system gnu-build-system) + (arguments + `(#:configure-flags + (list (string-append "--with-boost=" + (assoc-ref %build-inputs "boost")) + (string-append "--with-python-module-path=" + (assoc-ref %outputs "out") + "/lib/python" + ,(version-major+minor + (package-version + (car (assoc-ref + (package-inputs this-package) + "python")))) + "/site-packages/")))) + (native-inputs + `(("gcc-10" ,gcc-10) + ("ncurses" ,ncurses) + ("pkg-config" ,pkg-config))) + (inputs + `(("boost" ,boost) + ("cairomm" ,cairomm) + ("cgal" ,cgal) + ("expat" ,expat) + ("gmp" ,gmp) + ("gtk+" ,gtk+) + ("python" ,python-wrapper) + ("sparsehash" ,sparsehash))) + (propagated-inputs + `(("python-matplotlib" ,python-matplotlib) + ("python-numpy" ,python-numpy) + ("python-pycairo" ,python-pycairo) + ("python-scipy" ,python-scipy))) + (synopsis "Manipulate and analyze graphs with Python efficiently") + (description "Graph-tool is an efficient Python module for manipulation +and statistical analysis of graphs (a.k.a. networks). Contrary to most other +Python modules with similar functionality, the core data structures and +algorithms are implemented in C++, making extensive use of template +metaprogramming, based heavily on the Boost Graph Library. This confers it a +level of performance that is comparable (both in memory usage and computation +time) to that of a pure C/C++ library.") + (home-page "https://graph-tool.skewed.de/") + (license license:lgpl3+))) |