diff options
Diffstat (limited to 'gnu/packages/graphviz.scm')
| -rw-r--r-- | gnu/packages/graphviz.scm | 64 |
1 files changed, 63 insertions, 1 deletions
diff --git a/gnu/packages/graphviz.scm b/gnu/packages/graphviz.scm index b5c4774d5c..5685864d4c 100644 --- a/gnu/packages/graphviz.scm +++ b/gnu/packages/graphviz.scm @@ -9,6 +9,7 @@ ;;; Copyright © 2020 Marius Bakke <mbakke@fastmail.com> ;;; Copyright © 2020 Vincent Legoll <vincent.legoll@gmail.com> ;;; Copyright © 2020 Pjotr Prins <pjotr.guix@thebird.nl> +;;; Copyright © 2021 Bonface Munyoki Kilyungi <me@bonfacemunyoki.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -48,7 +49,9 @@ #:use-module (gnu packages perl) #:use-module (gnu packages pkg-config) #:use-module (gnu packages python) + #:use-module (gnu packages python-check) #:use-module (gnu packages python-xyz) + #:use-module (gnu packages sphinx) #:use-module (gnu packages swig) #:use-module (gnu packages tcl) #:use-module (gnu packages tex) @@ -59,6 +62,7 @@ (define-public graphviz (package (name "graphviz") + (replacement graphviz/fixed) (version "2.42.3") (source (origin (method url-fetch) @@ -113,7 +117,7 @@ ("swig" ,swig) ("pkg-config" ,pkg-config))) (outputs '("out" "doc")) ; 5 MiB of html + pdfs - (home-page "http://www.graphviz.org/") + (home-page "https://www.graphviz.org/") (synopsis "Graph visualization software") (description "Graphviz is a graph visualization tool suite. Graph visualization is a @@ -123,6 +127,15 @@ software engineering, database and web design, machine learning, and in visual interfaces for other technical domains.") (license license:epl1.0))) +(define-public graphviz/fixed + (hidden-package + (package + (inherit graphviz) + (source (origin + (inherit (package-source graphviz)) + (patches (append (search-patches "graphviz-CVE-2020-18032.patch") + (origin-patches (package-source graphviz))))))))) + ;; Older Graphviz needed for pygraphviz. See ;; https://github.com/pygraphviz/pygraphviz/issues/175 (define-public graphviz-2.38 @@ -242,6 +255,55 @@ structure and layout algorithms.") (define-public python2-pygraphviz (package-with-python2 python-pygraphviz)) +(define-public python-uqbar + (package + (name "python-uqbar") + (version "0.5.1") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/josiah-wolf-oberholtzer/uqbar") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0413nyhd8z8v3lvsgaghhafnyxg90fi1q80j1kbl21gpmpnc9a7n")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'patch + (lambda _ + (substitute* "setup.py" + ;; Latest versions of sphink-rtd-theme require npm to build. + (("sphinx-rtd-theme >= 0.4.0") "sphinx-rtd-theme >= 0.2.4") + (("black == 19.10b0") "black >= 19.10b0")) + #t)) + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "python" "-m" "pytest" "tests")) + #t))))) + (native-inputs + `(("graphviz" ,graphviz) + ("python-flake8" ,python-flake8) + ("python-isort" ,python-isort) + ("python-mypy" ,python-mypy) + ("python-pytest" ,python-pytest) + ("python-pytest-cov" ,python-pytest-cov))) + (propagated-inputs + `(("python-black" ,python-black) + ("python-sphinx" ,python-sphinx) + ("python-sphinx-rtd-theme" ,python-sphinx-rtd-theme) + ("python-unidecode" ,python-unidecode))) + (home-page "https://github.com/josiah-wolf-oberholtzer/uqbar") + (synopsis "Tools for building documentation with Sphinx, Graphviz and LaTeX") + (description + "This package contains tools for building documentation with Sphinx, +Graphviz and LaTeX.") + (license license:expat))) + (define-public gts (package (name "gts") |