diff options
Diffstat (limited to 'gnu/packages/python-check.scm')
| -rw-r--r-- | gnu/packages/python-check.scm | 211 |
1 files changed, 131 insertions, 80 deletions
diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index f02ca10298..b39709d960 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2019, 2021, 2022, 2023 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2019, 2021-2024 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2019, 2020, 2021, 2022, 2023 Maxim Cournoyer <maxim.cournoyer@gmail.com> @@ -17,6 +17,8 @@ ;;; Copyright © 2022 Felix Gruber <felgru@posteo.net> ;;; Copyright © 2022 Tomasz Jeneralczyk <tj@schwi.pl> ;;; Copyright © 2022 jgart <jgart@dismail.de> +;;; Copyright © 2024 Troy Figiel <troy@troyfigiel.com> +;;; Copyright © 2024 Navid Afkhami <navid.afkhami@mdc-berlin.de> ;;; ;;; This file is part of GNU Guix. ;;; @@ -106,20 +108,16 @@ data in a standard way.") (uri (pypi-uri "beartype" version)) (sha256 (base32 "0amzckgw9c93bl4jf0q6322j9wyyf3i8vl03yixfkrpllzv6kv14")))) - (build-system python-build-system) + (build-system pyproject-build-system) (arguments - (list #:phases - #~(modify-phases %standard-phases - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "pytest" "-vv" "beartype_test" - ;; These tests rely on git through the - ;; "get_main_readme_file" helper. - "-k" - (string-append "not test_doc_readme " - "and not test_sphinx " - "and not test_pep561_mypy")))))))) + (list + #:test-flags + #~(list + "beartype_test" + ;; These tests rely on git through the "get_main_readme_file" helper. + "-k" (string-append "not test_doc_readme " + "and not test_sphinx " + "and not test_pep561_mypy")))) (native-inputs (list python-pytest)) (home-page "https://github.com/beartype/beartype") @@ -182,15 +180,7 @@ tests in cram.") (sha256 (base32 "17518f2fn5l98lyk9p8r7215c1whi61imzrh6ahrmcksr8w0zz04")))) - (build-system python-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (replace 'check - (lambda* (#:key tests? inputs outputs #:allow-other-keys) - (when tests? - (add-installed-pythonpath inputs outputs) - (invoke "pytest"))))))) + (build-system pyproject-build-system) (native-inputs (list python-pytest-flake8 python-pytest-xdist python-tabulate)) (propagated-inputs @@ -331,27 +321,35 @@ result documents that can be read by tools such as Jenkins or Bamboo.") (define-public python-pyinstrument (package (name "python-pyinstrument") - (version "4.1.1") + (version "4.6.2") (source (origin (method url-fetch) (uri (pypi-uri "pyinstrument" version)) (sha256 - (base32 "18n3waxsxcd48pmcp8158s5rlancll2000amrdck9zfj5hfpkhhx")))) - (build-system python-build-system) + (base32 "1xnp1pjhcj1xl4dq20yzzj9599cmiyxb2azblsyjnl6qgr8yw0h0")))) + (build-system pyproject-build-system) + (arguments + (list + #:test-flags + #~(list "-k" (string-append + ;; Disable some failing tests. + "not test_script_execution_details" + " and not test_path_execution_details" + " and not test_module_execution_details" + " and not test_program_passed_as_string_execution_details")) + #:phases + #~(modify-phases %standard-phases + (add-before 'check 'build-extensions + (lambda _ + (setenv "HOME" "/tmp") + (invoke "python" "setup.py" "build_ext" "--inplace")))))) (native-inputs (list python-flaky + python-greenlet python-pytest python-pytest-asyncio python-pytest-trio)) - (arguments - `(;; TODO: Get tests to work. - #:tests? #f - #:phases (modify-phases %standard-phases - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "pytest" "-vv"))))))) (home-page "https://github.com/joerick/pyinstrument") (synopsis "Call stack profiler for Python") (description @@ -429,31 +427,20 @@ interactions, which will update them to correspond to the new API.") (sha256 (base32 "1dkr86nxkxc0ka3rdnpmk335m8gl1zh1sy8i7w4w1jsidbf82jvw")))) - (build-system python-build-system) + (build-system pyproject-build-system) (arguments - ;; FIXME: Tests fail a lot, probably requiring Internet access. - (list #:tests? #f - #:phases #~(modify-phases %standard-phases - (replace 'build - (lambda _ - (setenv "SETUPTOOLS_SCM_PRETEND_VERSION" - #$version) - (setenv "SOURCE_DATE_EPOCH" "315532800") - (invoke "python" - "-m" - "build" - "--wheel" - "--no-isolation" - "."))) - (add-before 'check 'disable-unsupported-test - (lambda _ - (substitute* "tests/test_async.py" - (("def test_asynctest") - "def __off_test_asynctest")))) - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "python" "-m" "pytest" "-vvv"))))))) + (list + #:test-flags + #~(list "-k" (string-append + ;; Disable test requiring network access. + "not test_disable_socket_urllib" + " and not test_parametrize_with_socket_enabled_and_allow_hosts" + " and not test_global_disable_and_allow_host" + " and not test_asynctest" + " and not test_httpx_fails" + " and not test_disabled_urllib_fails" + " and not test_urllib_succeeds_by_default" + " and not test_enabled_urllib_succeeds")))) (native-inputs (list python-httpx python-poetry-core python-pypa-build @@ -559,20 +546,25 @@ astropy related packages.") (define-public python-pytest-arraydiff (package (name "python-pytest-arraydiff") - (version "0.5.0") + (version "0.6.1") (source (origin (method url-fetch) (uri (pypi-uri "pytest-arraydiff" version)) (sha256 - (base32 "1livzfbi7ag17hskd5845dh1kdir24f7jrbw8y2s1pyhzyz4jhbi")))) - (build-system python-build-system) + (base32 "1pk7v96rkypx4ld59f6p8fh5bq371ka8g7bh4h7n4df91x2v2dr9")))) + (build-system pyproject-build-system) (arguments - ;; Tests require python-astropy, which itself requires this package. - ;; Disable tests to avoid the circular dependency problem. - '(#:tests? #f)) + (list + #:test-flags + #~(list "-k" (string-append + ;; Disable tests requiring python-astropy, to break cycle. + "not test_succeeds_func_fits_hdu" + " and not test_fails" + " and not test_generate" + " and not test_default_format")))) (native-inputs - (list python-pytest python-setuptools-scm)) ; for sanity-check + (list python-pytest python-setuptools-scm)) (propagated-inputs (list python-numpy)) (home-page "https://github.com/astropy/pytest-arraydiff") @@ -618,26 +610,29 @@ running the tests.") (define-public python-pytest-doctestplus (package (name "python-pytest-doctestplus") - (version "1.0.0") + (version "1.2.0") (source (origin (method url-fetch) (uri (pypi-uri "pytest-doctestplus" version)) (sha256 - (base32 "17ylfnrcvvp6sd13bfj40jl40paqmjsbywysszb3xqgdr86l8l7n")))) + (base32 "0cmrkgpib869kpy8h8hfkg20w16lakkmbkw8cxdywpmf5wx7dbf5")))) (build-system pyproject-build-system) (arguments (list #:test-flags #~(list "-k" (string-append + ;; Tests requiring network access. "not test_remote_data_url" " and not test_remote_data_float_cmp" " and not test_remote_data_ignore_whitespace" " and not test_remote_data_ellipsis" " and not test_remote_data_requires" - " and not test_remote_data_ignore_warnings")))) + " and not test_remote_data_ignore_warnings" + ;; Requiring git available. + " and not test_generate_diff_basic")))) (native-inputs (list python-numpy python-pytest python-setuptools-scm)) - (home-page "https://github.com/astropy/pytest-doctestplus") + (home-page "https://github.com/scientific-python/pytest-doctestplus") (synopsis "Pytest plugin with advanced doctest features") (description "This package contains a plugin for the Pytest framework that provides @@ -674,13 +669,13 @@ for interactively selecting and running Pytest tests.") (define-public python-pytest-filter-subpackage (package (name "python-pytest-filter-subpackage") - (version "0.1.2") + (version "0.2.0") (source (origin (method url-fetch) (uri (pypi-uri "pytest-filter-subpackage" version)) (sha256 - (base32 "10hpl3f7g2bm29lakmp8492b7lr0dp90khfni12m4gl02xks7bhz")))) + (base32 "0mmgg2n8qk6s2kprycjl70lxcpm43dkapplmkf32i0ai6qdqyiiz")))) (build-system pyproject-build-system) (native-inputs (list python-pytest @@ -1107,6 +1102,28 @@ of the project to ensure it renders properly.") simpler.") (license license:expat))) +(define-public python-pytest-testmon + (package + (name "python-pytest-testmon") + (version "2.1.1") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/tarpas/pytest-testmon") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "01qhbkb3n8c5c4id94w6b06q9wb7b6a33mqwyrkdfzk5pzv1gcyd")))) + (build-system pyproject-build-system) + (arguments (list #:tests? #false)) ;there are none + (native-inputs (list python-coverage python-pytest)) + (home-page "https://github.com/tarpas/pytest-testmon") + (synopsis "Selects tests affected by changed files and methods") + (description + "This plug-in auto-selects and reruns tests impacted by recent changes.") + (license license:expat))) + (define-public python-pytest-trio (package (name "python-pytest-trio") @@ -2140,20 +2157,29 @@ help in debugging failures and optimizing the scheduler to improve speed.") (method url-fetch) (uri (pypi-uri "pytest-sanic" version)) (sha256 - (base32 - "0shq1bqnydj0l3ipb73j1qh5kqcjvzkps30zk8grq3dwmh3wmnkr")))) + (base32 + "0shq1bqnydj0l3ipb73j1qh5kqcjvzkps30zk8grq3dwmh3wmnkr")))) + ;; We don't use pyproject-build-system because that would require + ;; poetry.masonry. (build-system python-build-system) (arguments ;; Tests depend on python-sanic. - `(#:tests? #f)) + (list + #:tests? #f + #:phases + '(modify-phases %standard-phases + (add-after 'unpack 'relax-requirements + (lambda _ + (substitute* "setup.py" + (("websockets.*<11.0") + "websockets<12.0"))))))) (propagated-inputs - (list python-httpx python-async-generator python-pytest - python-websockets)) - (home-page - "https://github.com/yunstanford/pytest-sanic") + (list python-httpx python-async-generator python-pytest + python-websockets)) + (home-page "https://github.com/yunstanford/pytest-sanic") (synopsis "Pytest plugin for Sanic") - (description "A pytest plugin for Sanic. It helps you to test your -code asynchronously.") + (description "This package provides a pytest plugin for Sanic. It helps +you to test your code asynchronously.") (license license:expat))) (define-public python-allpairspy @@ -2329,6 +2355,31 @@ Avocado machine readable outputs this one is streamlined (per test results). @end table") (license license:gpl2))) ;some files are under GPLv2 only +(define-public python-pandas-vet + (package + (name "python-pandas-vet") + ;; Newer versions require flake8>=6.0.0. + (version "0.2.3") + (source + (origin + ;; No tests in the PyPI tarball. + (method git-fetch) + (uri (git-reference + (url "https://github.com/deppen8/pandas-vet") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1b3pqcargv68p2lpv72q49siq6mxfh3znxhz9vd91rp6fd6lf2cz")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-attrs python-flake8)) + (native-inputs (list python-pytest)) + (home-page "https://github.com/deppen8/pandas-vet") + (synopsis "Opionated @code{flake8} plugin for @code{pandas} code") + (description + "This package provides a @code{flake8} plugin to lint @code{pandas} code +in an opinionated way.") + (license license:expat))) + (define-public python-parameterizedtestcase (package (name "python-parameterizedtestcase") |