diff options
Diffstat (limited to 'gnu/packages/python-science.scm')
| -rw-r--r-- | gnu/packages/python-science.scm | 39 |
1 files changed, 8 insertions, 31 deletions
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 34403d8566..8bab7b81d3 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -3357,48 +3357,25 @@ of Pandas (define-public python-pingouin (package (name "python-pingouin") - (version "0.5.4") + (version "0.5.5") (source - ;; The PyPI tarball does not contain the tests. (origin - (method git-fetch) + (method git-fetch) ; no tests in PyPI tarball (uri (git-reference (url "https://github.com/raphaelvallat/pingouin") (commit (string-append "v" version)))) (file-name (git-file-name name version)) (sha256 (base32 - "1j3qkgvyc31604ddl952h4hwza7schg8kwkycmxvpvx7xjj7nn68")))) + "0i3yzdlj08di3mzi69ci57jm5myl123hp8c5vn1g35k77m4zpgvd")))) (build-system pyproject-build-system) (arguments (list - #:test-flags - ;; This one fails due to minor differences in accuracy - '(list "-k" "not test_logistic_regression") - #:phases - '(modify-phases %standard-phases - (add-after 'unpack 'loosen-requirements - (lambda _ - (substitute* '("requirements.txt" "setup.py") - ;; Remove sklearn pinning since it works fine with 1.1.2: - ;; https://github.com/raphaelvallat/pingouin/pull/300 - (("scikit-learn<1\\.1\\.0") - "scikit-learn")))) - ;; On loading, Pingouin uses the outdated package to check if a newer - ;; version is available on PyPI. This check adds an extra dependency - ;; and is irrelevant to Guix users. So, disable it. - (add-after 'unpack 'remove-outdated-check - (lambda _ - (substitute* "setup.py" - (("\"outdated\",") "")) - (substitute* "pingouin/__init__.py" - (("^from outdated[^\n]*") "") - (("^warn_if_outdated[^\n]*") "")))) - (add-after 'unpack 'sklearn-compatibility - (lambda _ - (substitute* "pingouin/regression.py" - (("kwargs\\[\"penalty\"\\] = \"none\"") - "kwargs[\"penalty\"] = None"))))))) + ;; _flapack.error: (liwork>=max(1,10*n)||liwork==-1) + ;; failed for 10th keyword liwork: dsyevr:liwork=1 + #:test-flags #~(list "-k" (string-append + "not test_box_m" + " and not test_linear_regression")))) (native-inputs (list python-pytest python-pytest-cov)) (propagated-inputs |