diff options
Diffstat (limited to 'gnu/packages/python-science.scm')
| -rw-r--r-- | gnu/packages/python-science.scm | 68 |
1 files changed, 38 insertions, 30 deletions
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index e7c32481e9..61f75dd6b6 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -1350,6 +1350,7 @@ that is 20-25x faster than @code{numpy.histogram2d}.") (sha256 (base32 "19labbgnq85p4r4jbli2p045lgh57larhi2g2anagfxnlzpqdf5a")))) (build-system pyproject-build-system) + (arguments (list #:test-backend #~'unittest)) (propagated-inputs (list python-numpy)) (native-inputs (list python-scipy python-setuptools python-wheel)) (home-page "https://danifold.net/fastcluster.html") @@ -1906,7 +1907,11 @@ between dataframe libraries. (sha256 (base32 "1lpgsagmgxzsas7g8yiv6wmyss8q57w92h70fn11rnpadsvx16xz")))) (build-system pyproject-build-system) - (arguments (list #:test-flags #~(list "-c" "/dev/null"))) ;avoid coverage + (arguments + (list + #:test-flags + #~(list "-c" "/dev/null" ;avoid coverage + "-k" "not test_iter_indices_matmul"))) ; flaky (native-inputs (list python-cython python-numpy @@ -2445,19 +2450,19 @@ or as a TikZ file for use in LaTeX documents; (define-public python-qdldl (package (name "python-qdldl") - (version "0.1.7.post2") + (version "0.1.7.post5") (source (origin (method url-fetch) (uri (pypi-uri "qdldl" version)) (sha256 - (base32 "1lspam0k8gnw1yglqxvdv350fq00nkgdfmkizmx7bk0hxjjkj5ab")))) + (base32 "0vi8dgrw32qj03z2dd3zqd0d625pibq3xmlgmidfsnwvqkhrj4qb")))) (build-system pyproject-build-system) (native-inputs (list cmake-minimal pybind11 - python-setuptools - python-wheel)) + python-pytest + python-setuptools)) (propagated-inputs (list python-numpy python-scipy)) (home-page "https://github.com/oxfordcontrol/qdldl-python/") (synopsis "QDLDL LDL factorization routine") @@ -5469,34 +5474,37 @@ data.") (license license:expat))) (define-public python-supersmoother - (package - (name "python-supersmoother") - (version "0.4") - (source - (origin - (method git-fetch) ; no package in PyPI - (uri (git-reference - (url "https://github.com/jakevdp/supersmoother") - (commit (string-append "v" version)))) - (file-name (git-file-name name version)) - (sha256 - (base32 "1lkj8l2mpki6x2pxcwlrplx63lhi8h9v2rzxgjfb0cppsfr8m1wp")))) - (build-system pyproject-build-system) - (native-inputs - (list python-pytest - python-scipy - python-setuptools - python-wheel)) - (propagated-inputs - (list python-numpy)) - (home-page "http://github.com/jakevdp/supersmoother") - (synopsis "Python implementation of Friedman's Supersmoother") - (description - "This package provides an efficient implementation of + ;; 0.4 was release in 2017, there a lot of changes on master branch + ;; providing tests fixtures. + (let ((commit "0a81544ac6bb33bdb08deeba69e97a4ceebcebcf") + (revision "0")) + (package + (name "python-supersmoother") + (version (git-version "0.4" revision commit)) + (source + (origin + (method git-fetch) ; no package in PyPI + (uri (git-reference + (url "https://github.com/jakevdp/supersmoother") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1r79nssw4a44zizvqg8y685nv3asdfj440s227phfww6kz33s3la")))) + (build-system pyproject-build-system) + (native-inputs + (list python-pytest + python-scipy + python-setuptools)) + (propagated-inputs + (list python-numpy)) + (home-page "http://github.com/jakevdp/supersmoother") + (synopsis "Python implementation of Friedman's Supersmoother") + (description + "This package provides an efficient implementation of @url{https://www.slac.stanford.edu/pubs/slacpubs/3250/slac-pub-3477.pdf, Friedman's SuperSmoother} based in Python. It makes use of numpy for fast numerical computation.") - (license license:bsd-2))) + (license license:bsd-2)))) (define-public python-pylems (package |