diff options
Diffstat (limited to 'gnu/packages/python-xyz.scm')
| -rw-r--r-- | gnu/packages/python-xyz.scm | 538 |
1 files changed, 393 insertions, 145 deletions
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index 8bd43cb6d3..f7e3f6f538 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -59,14 +59,14 @@ ;;; Copyright © 2019, 2020 Brett Gilio <brettg@gnu.org> ;;; Copyright © 2019 Sam <smbaines8@gmail.com> ;;; Copyright © 2019, 2023 Jack Hill <jackhill@jackhill.us> -;;; Copyright © 2019, 2020, 2021, 2022 Guillaume Le Vaillant <glv@posteo.net> +;;; Copyright © 2019-2023, Guillaume Le Vaillant <glv@posteo.net> ;;; Copyright © 2019, 2020 Alex Griffin <a@ajgrf.com> ;;; Copyright © 2019, 2020, 2021, 2022 Pierre Langlois <pierre.langlois@gmx.com> ;;; Copyright © 2019 Jacob MacDonald <jaccarmac@gmail.com> ;;; Copyright © 2019, 2020, 2021 Giacomo Leidi <goodoldpaul@autistici.org> ;;; Copyright © 2019 Wiktor Żelazny <wzelazny@vurv.cz> ;;; Copyright © 2019, 2020, 2021, 2022 Tanguy Le Carrour <tanguy@bioneland.org> -;;; Copyright © 2019, 2021, 2022 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> +;;; Copyright © 2019, 2021-2023 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> ;;; Copyright © 2020 Riku Viitanen <riku.viitanen@protonmail.com> ;;; Copyright © 2020 Jakub Kądziołka <kuba@kadziolka.net> ;;; Copyright © 2020 sirgazil <sirgazil@zoho.com> @@ -583,6 +583,26 @@ and variables you'll need already imported and created. scipy and numpy of negative binomial maximum likelihood estimation.") (license license:gpl3+))) +(define-public python-docrep + (package + (name "python-docrep") + (version "0.3.2") + (source (origin + (method url-fetch) + (uri (pypi-uri "docrep" version)) + (sha256 + (base32 + "0523jrzjj29kxpdllmfhrfj9kysi9mphp2m7ippjkn5b07i1g2pd")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-six)) + (native-inputs (list python-pytest python-pytest-runner)) + (home-page "https://github.com/Chilipp/docrep") + (synopsis "Python package for docstring repetition") + (description "Docrep is the documentation repetition module. This module +targets developers that develop complex and nested Python APIs and helps them +to create a well-documented piece of software.") + (license license:asl2.0))) + (define-public python-dotmap (package (name "python-dotmap") @@ -621,6 +641,29 @@ remembers the order in which the items were inserted and supports almost all the features of the Python's built-in dict.") (license license:unlicense))) +(define-public python-adjusttext + (package + (name "python-adjusttext") + (version "0.8") + (source (origin + (method url-fetch) + (uri (pypi-uri "adjustText" version)) + (sha256 + (base32 + "05zf0xn7ab40dan213fwbp1z4rybih8dphf9mzb2ddmbafxq41mv")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-matplotlib python-numpy)) + (home-page "https://github.com/Phlya/adjustText") + (synopsis "Adjust text position in matplotlib plots to minimize overlaps") + (description + "Often when we want to label multiple points on a graph the text will +start heavily overlapping with both other labels and data points. This can be +a major problem requiring manual solution. However this can be largely +automatized by smart placing of the labels (difficult) or iterative adjustment +of their positions to minimize overlaps (relatively easy). This library +implements the latter option to help with matplotlib graphs.") + (license license:expat))) + (define-public python-argopt (package (name "python-argopt") @@ -1141,6 +1184,67 @@ commits.") generator MkDocs.") (license license:expat))) +(define-public python-skranger + (package + (name "python-skranger") + (version "0.8.0") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/crflynn/skranger") + (commit version) + (recursive? #true))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0njy4xbc98l295k92nyk93njv1348vd1il5pdyrnk8nnzc2anzf0")))) + (build-system pyproject-build-system) + (arguments + (list + #:modules '((guix build pyproject-build-system) + (guix build utils) + (ice-9 match)) + #:test-flags + ;; "from sklearn.datasets import load_boston" fails because it has been + ;; removed from scikit-learn since version 1.2. + '(list "--ignore=tests/conftest.py" + "--ignore=tests/test_tools.py" + "--ignore=tests/tree/test_regressor.py" + "--ignore=tests/ensemble/test_regressor.py") + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'fix-tests + (lambda _ + (substitute* "tests/conftest.py" + (("from sklearn.datasets import load_boston") "") + (("^_boston_X.*") "_boston_X, _boston_Y = (True, True)\n")))) + (add-before 'check 'build-extensions + (lambda _ + ;; Cython extensions have to be built before running the tests. + (invoke "python" "buildpre.py") + (invoke "python" "build.py" "build_ext" "--inplace") + (let ((site (string-append #$output "/lib/python" + #$(version-major+minor + (package-version python)) + "/site-packages/skranger")) + (lib (match (find-files "build" "\\.so") + ((the-lib) the-lib) + (_ (error "could not find .so"))))) + (mkdir-p site) + (install-file lib site))))))) + (propagated-inputs (list python-scikit-learn)) + (native-inputs + (list python-cython + python-matplotlib + python-pandas + python-poetry-core + python-pytest)) + (home-page "https://github.com/crflynn/skranger") + (synopsis "Python bindings for C++ ranger random forests") + (description "This package provides scikit-learn compatible Python +bindings to the C++ random forest implementation, ranger, using Cython.") + (license license:gpl3+))) + (define-public python-slixmpp (package (name "python-slixmpp") @@ -2690,6 +2794,26 @@ a library.") (description "DiskCache is a disk and file backed persistent cache.") (license license:asl2.0))) +(define-public python-optparse-pretty + (package + (name "python-optparse-pretty") + (version "0.1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "optparse-pretty" version)) + (sha256 + (base32 "1920wbh2b7a8qn7zx2iiqbcdaax335l81a73x9pp8h11yzs2jdmh")))) + (build-system pyproject-build-system) + (arguments (list #:tests? #false)) ;There are none + (home-page "https://github.com/gvalkov/optparse-pretty") + (synopsis "Compact help formatter for optparse") + (description + "This module provides two help formatters for optparse. They provide +terser and more customizable option formatting in comparison to the default +help formatter.") + (license license:bsd-3))) + (define-public python-orjson (package (name "python-orjson") @@ -2703,9 +2827,14 @@ a library.") (build-system cargo-build-system) (arguments (list + #:imported-modules `(,@%cargo-build-system-modules + ,@%pyproject-build-system-modules) + #:modules '((guix build cargo-build-system) + ((guix build pyproject-build-system) #:prefix py:) + (guix build utils)) #:phases #~(modify-phases %standard-phases - (add-after 'install 'build-python-module + (add-after 'install 'prepare-python-module (lambda _ ;; We don't use maturin. (delete-file "pyproject.toml") @@ -2719,10 +2848,9 @@ requires = ['setuptools'] (call-with-output-file "setup.cfg" (lambda (port) (format port "\ - [metadata] name = orjson -version = '~a' +version = ~a [options] packages = find: @@ -2733,15 +2861,11 @@ exclude = integration test Cargo.toml -" #$version))) - ;; ZIP does not support timestamps before 1980. - (setenv "SOURCE_DATE_EPOCH" "315532800") - (invoke "python" "-m" "build" "--wheel" "--no-isolation" "."))) +" #$version))))) + (add-after 'prepare-python-module 'build-python-module + (assoc-ref py:%standard-phases 'build)) (add-after 'build-python-module 'install-python-module - (lambda* (#:key outputs #:allow-other-keys) - (let ((whl (car (find-files "dist" "\\.whl$")))) - (invoke "pip" "--no-cache-dir" "--no-input" - "install" "--no-deps" "--prefix" #$output whl)))) + (assoc-ref py:%standard-phases 'install)) (add-after 'install-python-module 'install-python-library (lambda _ (let ((site (string-append #$output "/lib/python" @@ -4870,22 +4994,8 @@ recognition library with full Unicode support. It has features like: (sha256 (base32 "1nh75i72584r70alhqc479gys04s5m5g3vq601yf2njbs7z5jzng")))) - (build-system python-build-system) - (arguments - (list - #:tests? #f ;pypi source does not contains tests - #:phases - #~(modify-phases %standard-phases - (replace 'build - (lambda _ (invoke "flit" "build"))) - (replace 'install - (lambda* (#:key inputs outputs #:allow-other-keys) - (add-installed-pythonpath inputs outputs) - (for-each - (lambda (wheel) - (invoke "python" "-m" "pip" "install" - wheel (string-append "--prefix=" #$output))) - (find-files "dist" "\\.whl$"))))))) + (build-system pyproject-build-system) + (arguments (list #:tests? #f)) ;pypi source does not contains tests (native-inputs (list python-flit)) (propagated-inputs (list python-mdurl @@ -9588,6 +9698,37 @@ module with a few extra procedures.") releases.") (license license:expat))) +(define-public python-jaraco-test + (package + (name "python-jaraco-test") + (version "5.3.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "jaraco.test" version)) + (sha256 + (base32 + "0h0x8qmvfkfqvwdx2m7kwhn53sg26k8gkaas7s1730ak772zqrvz")))) + (build-system pyproject-build-system) + (arguments + (list + #:phases #~(modify-phases %standard-phases + (replace 'check + (lambda _ + (invoke "pytest" "-vv" "-k" "http")))))) + (propagated-inputs (list python-jaraco-context python-jaraco-functools)) + (native-inputs (list python-flake8 + python-pytest + python-pytest-black + python-pytest-checkdocs + python-pytest-cov + python-pytest-enabler + python-pytest-flake8 + python-pytest-mypy)) + (home-page "https://github.com/jaraco/jaraco.test") + (synopsis "Testing support by jaraco") + (description "This package provides testing support by jaraco.") + (license license:expat))) + (define-public python-simplegeneric (package (name "python-simplegeneric") @@ -11094,27 +11235,7 @@ SVG, EPS, PNG and terminal output.") (sha256 (base32 "08vvnp4ps86857imxz2l5xi2vir5xdcdp3apq4badb4b5llifgw9")))) - (build-system python-build-system) - (arguments - (list #:modules '((guix build python-build-system) - (guix build utils) - (ice-9 match)) - #:phases #~(modify-phases %standard-phases - (replace 'build - (lambda _ - (invoke "python" "-m" "build" "--wheel" - "--no-isolation" "."))) - (replace 'install - (lambda _ - (match (find-files "dist" "\\.whl$") - ((wheel _ ...) - (invoke "python" "-m" "pip" "install" - (string-append "--prefix=" #$output) - wheel))))) - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "pytest" "-vv"))))))) + (build-system pyproject-build-system) (propagated-inputs (list python-pandas python-matplotlib python-numpy python-scipy)) (native-inputs (list python-flit-core python-pypa-build python-pytest)) @@ -11127,7 +11248,6 @@ with the PyData stack, including support for numpy and pandas data structures and statistical routines from scipy and statsmodels.") (license license:bsd-3))) - (define-public python-session-info (package (name "python-session-info") @@ -11716,7 +11836,37 @@ you do not want to store entirely on disk or on memory.") " and not test_httplib_misuse" ;; Fails with IndexError. " and not test_session_mode_defaults_to" - "_request_mode_in_wsgi_handler")))))))) + "_request_mode_in_wsgi_handler" + ;; Tests below fail with pytest 7 + " and not test_leaks" + " and not test_basic" + " and not test_keyboard_interrupt_is_captured" + " and not test_transaction_with_error" + " and not test_transaction_no_error" + " and not test_start_span_to_start_transaction" + " and not test_tracestate_computation" + " and not test_doesnt_add_new_tracestate_to_transaction_when_none_given" + " and not test_adds_tracestate_to_transaction_when_to_traceparent_called" + " and not test_adds_tracestate_to_transaction_when_getting_trace_context" + " and not test_tracestate_is_immutable_once_set" + " and not test_to_traceparent" + " and not test_to_tracestate" + " and not test_sentrytrace_extraction" + " and not test_tracestate_extraction" + " and not test_iter_headers" + " and not test_tracestate_reinflation" + " and not test_continue_from_headers" + " and not test_memory_usage" + " and not test_transactions_do_not_go_through_before_send" + " and not test_start_span_after_finish" + " and not test_span_trimming" + " and not test_transaction_naming" + " and not test_start_transaction" + " and not test_finds_transaction_on_scope" + " and not test_finds_transaction_when_descendent_span_is_on_scope" + " and not test_finds_orphan_span_on_scope" + " and not test_finds_non_orphan_span_on_scope" + " and not test_circular_references")))))))) (native-inputs (list python-django python-executing @@ -11809,31 +11959,7 @@ plugin for flake8 to check PEP-8 naming conventions.") (sha256 (base32 "00zahgw9zjfqwf0218bj5k732aibnn68cq1p8f0wmbirb7fy5k31")))) - (build-system python-build-system) - (arguments - (list - #:phases - #~(modify-phases %standard-phases - ;; XXX: PEP 517 manual build/install procedures copied from - ;; python-isort. - (replace 'build - (lambda _ - ;; ZIP does not support timestamps before 1980. - (setenv "SOURCE_DATE_EPOCH" "315532800") - (invoke "python" "-m" "build" "--wheel" "--no-isolation" "."))) - (replace 'check - (lambda* (#:key tests? inputs outputs #:allow-other-keys) - (when tests? - (invoke "pytest" "-vv" - ;; Two parameterized test_load tests are currently - ;; failing (see: - ;; https://github.com/FFY00/python-pep621/issues/14). - "-k" "not test_load")))) - (replace 'install - (lambda* (#:key outputs #:allow-other-keys) - (let ((whl (car (find-files "dist" "\\.whl$")))) - (invoke "pip" "--no-cache-dir" "--no-input" - "install" "--no-deps" "--prefix" #$output whl))))))) + (build-system pyproject-build-system) (propagated-inputs (list python-packaging)) (native-inputs (list python-pypa-build python-pytest python-tomli)) (home-page "https://github.com/FFY00/python-pyproject-metadata") @@ -16860,13 +16986,13 @@ ISO 8859, etc.).") (define-public python-anyqt (package (name "python-anyqt") - (version "0.0.13") + (version "0.2.0") (source (origin (method url-fetch) (uri (pypi-uri "AnyQt" version)) (sha256 - (base32 "0z7myf0mp1qx4gza6ncqyq9whk67vblmh9n3klk19dv4aakjml2f")))) + (base32 "0fvnhdk0nzhlm1xydisvdq1w7lwaakdkbwb1rkyz4vd232wji4jb")))) (build-system python-build-system) (arguments `(#:tests? #f ;there are no tests @@ -17254,6 +17380,36 @@ can also be used to get the exact location, font or color of the text.") is made as zipfile like as possible.") (license license:isc))) +(define-public python-slugid + (package + (name "python-slugid") + (version "2.0.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/taskcluster/slugid.py") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1h64p2jlqv6lsmw8h2j203kx3bhv72cwzpk5gdhsaamw30cp3h1i")))) + (build-system python-build-system) + (native-inputs (list python-nose)) + (arguments + (list #:phases + #~(modify-phases %standard-phases + (replace 'check + (lambda* (#:key inputs tests? #:allow-other-keys) + (when tests? + ;; The project uses tox to run the tests via nose. + (invoke "nosetests" "-v" "test.py"))))))) + (home-page "http://taskcluster.github.io/slugid.py") + (synopsis "Module for Base64 encoded UUID v4 slugs") + (description "This package provides a module for generating v4 +UUIDs and encoding them into 22 character URL-safe base64 slug +representation.") + (license license:mpl2.0))) + (define-public python-rich (package (name "python-rich") @@ -18131,6 +18287,65 @@ specified in POSIX.1-2001 and POSIX.1-2008.") objects, patterned after the Mocha library for Ruby.") (license license:bsd-3))) +(define-public python-inflect + (package + (name "python-inflect") + (version "6.0.4") + (source (origin + (method url-fetch) + (uri (pypi-uri "inflect" version)) + (sha256 + (base32 + "1sqj4svg2vbn4vq332nxnvky2433rgxbvjd529lddjmn2yd68hhq")))) + (build-system pyproject-build-system) + (arguments + (list + #:test-flags + '(list "--ignore=_custom_build/backend.py" + "-k" "not mypy-status") + #:phases + '(modify-phases %standard-phases + ;; The build system insists on ignoring the existing environment and + ;; running "pip install". + (add-after 'unpack 'do-not-use-pip-install + (lambda _ + (substitute* "pyproject.toml" + (("^build-backend.*") "\ +build-backend = \"backend\" +backend_path = [\"_custom_build\"]\n") + (("requires = .*") "requires = []\n")) + (mkdir-p "_custom_build") + (with-output-to-file "_custom_build/backend.py" + (lambda _ + (display "\ +from setuptools import build_meta as _orig +from setuptools.build_meta import * +def get_requires_for_build_wheel(config_settings=None): + return [] +def get_requires_for_build_sdist(config_settings=None): + return [] +"))) + (setenv "PYTHONPATH" + (string-append (getcwd) "/_custom_build"))))))) + (propagated-inputs (list python-pydantic)) + (native-inputs (list python-flake8 + python-pygments + python-pytest + python-pytest-black + python-pytest-checkdocs + python-pytest-cov + python-pytest-enabler + python-pytest-flake8 + python-pytest-mypy + ;; For the version number + python-setuptools-scm)) + (home-page "https://github.com/jaraco/inflect") + (synopsis "Correctly generate plurals, singular nouns, ordinals, indefinite articles") + (description + "This Python module lets you correctly generate plurals, singular nouns, +ordinals, indefinite articles; it also can convert numbers to words.") + (license license:expat))) + (define-public python-inflection (package (name "python-inflection") @@ -22049,14 +22264,14 @@ functionality like full case-folding for case-insensitive matches in Unicode.") (define-public python-pyopengl (package (name "python-pyopengl") - (version "3.1.5") + (version "3.1.6") (source (origin (method url-fetch) (uri (pypi-uri "PyOpenGL" version)) (sha256 (base32 - "091lp9bpqi8yf1nmyg19xmvw611lrzq2q94cl1k5gnlh0c6vl1s1")))) + "09syrsfrcknr1k2wmj05gfd5d0dyjfxzbipzbd0agv9775vwi9lf")))) (build-system python-build-system) (inputs (list mesa freeglut glu)) @@ -22094,14 +22309,14 @@ library.") (package (inherit python-pyopengl) (name "python-pyopengl-accelerate") - (version "3.1.5") + (version "3.1.6") (source (origin (method url-fetch) (uri (pypi-uri "PyOpenGL-accelerate" version)) (sha256 (base32 - "01iggy5jwxv7lxnj51zbmlbhag9wcb7dvrbwgi97i90n0a5m3r8j")))) + "1hydrpdn4p4z6mlczcg1y4s0z8si3rs6zq8x4ql558pcaq1312md")))) (inputs (list mesa python-numpy)) ; for cython module ; numpy_formathandler, thus not propagated @@ -22727,19 +22942,27 @@ queue.") (define-public python-zict (package (name "python-zict") - (version "2.0.0") + (version "3.0.0") (source (origin (method url-fetch) (uri (pypi-uri "zict" version)) (sha256 (base32 - "05pd1hyhqvpw87rnbvl3vdyf619snpyccbswaxisdj17frwnjacf")))) - (build-system python-build-system) + "19gvr41xi5fazkzkg33kwrk70sv50hygng0cg70ayym9nriy48g3")))) + (build-system pyproject-build-system) + (arguments + (list + #:test-flags + ;; This uses "importorskip", but it won't skip. + '(list "--ignore=tests/test_lmdb.py"))) (propagated-inputs (list python-heapdict)) (native-inputs - (list python-pytest)) + (list python-pytest + python-pytest-asyncio + python-pytest-repeat + python-pytest-timeout)) (home-page "https://zict.readthedocs.io/en/latest/") (synopsis "Composable mutable mapping tools") (description "This package provides abstract @code{MutableMapping} classes @@ -22806,13 +23029,13 @@ user's @file{~/Trash} directory.") (define-public python-yamllint (package (name "python-yamllint") - (version "1.26.1") + (version "1.31.0") (source (origin (method url-fetch) (uri (pypi-uri "yamllint" version)) (sha256 - (base32 "090krlxj7az0d9yl8i20vjrqi66dfxx7y5xakjhxzsfp7qmldnc7")))) + (base32 "0rbs7xq7y7bp3k75z7jamrdrrfyp95hifsz0hwm1cgkk5z8z30rd")))) (build-system python-build-system) (propagated-inputs (list python-pathspec python-pyyaml python-setuptools)) @@ -24787,16 +25010,38 @@ append on old values. Partd excels at shuffling operations.") (define-public python-fsspec (package (name "python-fsspec") - (version "2022.5.0") + (version "2023.5.0") (source (origin - (method url-fetch) - (uri (pypi-uri "fsspec" version)) + (method git-fetch) + (uri (git-reference + (url "https://github.com/fsspec/filesystem_spec") + (commit version))) + (file-name (git-file-name name version)) (sha256 (base32 - "1d43qiz8g395042a52yswz6j7q41gvrv3k53wvxn1rs4bk3mjm3s")))) - (build-system python-build-system) - (arguments '(#:tests? #f)) ; there are none + "0c0brw5s4330rj0yjcrqi56hanvaahn43854jai70qzqg1qvyl88")))) + (build-system pyproject-build-system) + (arguments + (list + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'fix-version + (lambda _ + (substitute* "fsspec/__init__.py" + (("__version__ = .*") + (string-append "__version__ = \"" #$version "\""))) + (substitute* "setup.py" + (("versioneer.get_version\\(\\)") + (string-append "\"" #$version "\"")))))) + #:test-flags + '(list + ;; requires internet access + "--ignore=fsspec/implementations/tests/test_dbfs.py"))) + (propagated-inputs + (list python-aiohttp python-libarchive-c python-requests python-tqdm)) + (native-inputs + (list python-pytest python-pytest-mock python-numpy)) (home-page "https://github.com/intake/filesystem_spec") (synopsis "File-system specification") (description "The purpose of this package is to produce a template or @@ -24810,29 +25055,61 @@ decisions with any given backend.") (define-public python-dask (package (name "python-dask") - (version "2022.05.2") + (version "2023.4.1") (source (origin (method git-fetch) (uri (git-reference (url "https://github.com/dask/dask/") - (commit "8db1597c9745543df3129399bead5fbc95a54571"))) + (commit "a69a808f75a961504a9ba18058bff5e458be97fb"))) (file-name (git-file-name name version)) (sha256 - (base32 "1xfk3wml972z502w5ii5mn03ls3rg5p4hqgl0hkicgpmzlyz9kph")) - (snippet - ;; Delete generated copy of python-versioneer. We recreate it below. - '(delete-file "versioneer.py")))) - (build-system python-build-system) + (base32 "089kz6hcgl4yxwx99br1124sg1gkdy554hf120z9a5cfbrf0ah9y")))) + (build-system pyproject-build-system) (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'versioneer - (lambda _ - (invoke "versioneer" "install"))) - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? (invoke "pytest" "-vv"))))))) + (list + ;; Avoid coverage + #:test-flags + #~(list "-m" "not gpu and not slow and not network" + "-k" (string-append + ;; This one cannot be interrupted. + "not test_interrupt" + ;; This one expects a deprecation warning that never + ;; comes. + " and not test_RandomState_only_funcs") + ;; Tests must run from the output directory, because otherwise + ;; it complains about the difference between the target + ;; directory embedded in the pyc files and the source directory + ;; from which we run tests. + (getcwd)) + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'versioneer + (lambda _ + ;; Our version of versioneer needs setup.cfg. This is adapted + ;; from pyproject.toml. + (with-output-to-file "setup.cfg" + (lambda () + (display "\ +[versioneer] +VCS = git +style = pep440 +versionfile_source = dask/_version.py +versionfile_build = dask/_version.py +tag_prefix = +parentdir_prefix = dask- +"))) + (invoke "versioneer" "install") + (substitute* "setup.py" + (("versioneer.get_version\\(\\)") + (string-append "\"" #$version "\""))))) + (add-after 'unpack 'fix-pytest-config + (lambda _ + ;; This option is not supported by our version of pytest. + (substitute* "pyproject.toml" + (("--cov-config=pyproject.toml") "")))) + (add-before 'check 'pre-check + (lambda _ (chdir "/tmp")))))) (propagated-inputs (list python-cloudpickle python-fsspec @@ -24843,7 +25120,9 @@ decisions with any given backend.") python-toolz python-pyyaml)) (native-inputs - (list python-pytest python-pytest-runner python-pytest-rerunfailures + (list python-click + python-importlib-metadata + python-pytest python-pytest-runner python-pytest-rerunfailures python-versioneer)) (home-page "https://github.com/dask/dask/") (synopsis "Parallel computing with task scheduling") @@ -27270,7 +27549,7 @@ information for your operating system.") (uri (pypi-uri "canonicaljson" version)) (sha256 (base32 "0j5lq191jkd483q6xzc16c9fahxf15lrv03mvah9ka3lq85pcnfa")))) - (build-system python-build-system) + (build-system pyproject-build-system) (arguments (list #:phases @@ -27279,21 +27558,7 @@ information for your operating system.") (lambda _ ;; Permit newer versions of setuptools_scm (substitute* "pyproject.toml" - ((">= 2.0.0, <3") ">= 2.0.0")))) - (replace 'build - (lambda _ - ;; ZIP does not support timestamps before 1980. - (setenv "SOURCE_DATE_EPOCH" "315532800") - (invoke "python" "-m" "build" "--wheel" "--no-isolation" "."))) - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "pytest")))) - (replace 'install - (lambda _ - (let ((whl (car (find-files "dist" "\\.whl$")))) - (invoke "pip" "--no-cache-dir" "--no-input" - "install" "--no-deps" "--prefix" #$output whl))))))) + ((">= 2.0.0, <3") ">= 2.0.0"))))))) (native-inputs (list python-pypa-build python-pytest python-setuptools python-setuptools-scm)) (propagated-inputs @@ -32614,24 +32879,7 @@ Storage}.") (sha256 (base32 "1f3qrygj16y767q2c7pn9j6m95ggcmj9s5cx9v92ygygly4mr3jp")))) - (build-system python-build-system) - (arguments - (list - #:phases - #~(modify-phases %standard-phases - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "pytest" "-v" "tests")))) - ;; XXX: PEP 517 manual build copied from python-isort. - (replace 'build - (lambda _ - (invoke "python" "-m" "build" "--wheel" "--no-isolation" "."))) - (replace 'install - (lambda _ - (let ((whl (car (find-files "dist" "\\.whl$")))) - (invoke "pip" "--no-cache-dir" "--no-input" - "install" "--no-deps" "--prefix" #$output whl))))))) + (build-system pyproject-build-system) (native-inputs (list python-click python-poetry-core |