diff options
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index fd9ff0c678..1bb8c0d406 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -11989,6 +11989,30 @@ genes in the gene-set that are ranked above the leading edge).") "This package provides a pipeline for analysing Capture Hi-C data.") (license license:artistic2.0))) +;; This is a CRAN package, but it depends on Bioconductor packages, so we put +;; it here. +(define-public r-ciara + (package + (name "r-ciara") + (version "0.1.0") + (source (origin + (method url-fetch) + (uri (cran-uri "CIARA" version)) + (sha256 + (base32 + "0nr7wks9231326x0lhpbh824c6vcb5hr5jn89s9bmg9mci907bsf")))) + (properties `((upstream-name . "CIARA"))) + (build-system r-build-system) + (propagated-inputs (list r-biobase r-ggplot2 r-ggraph r-magrittr)) + (native-inputs (list r-knitr)) + (home-page "https://cran.r-project.org/package=CIARA") + (synopsis "Cluster-independent algorithm for rare cell types identification") + (description + "This is a package to support identification of markers of rare cell +types by looking at genes whose expression is confined in small regions of the +expression space.") + (license license:artistic2.0))) + (define-public r-cicero (package (name "r-cicero") |