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-rw-r--r--gnu/packages/chemistry.scm44
1 files changed, 37 insertions, 7 deletions
diff --git a/gnu/packages/chemistry.scm b/gnu/packages/chemistry.scm
index e42accfd47..aba31a1d31 100644
--- a/gnu/packages/chemistry.scm
+++ b/gnu/packages/chemistry.scm
@@ -157,7 +157,7 @@ bioinformatics, materials science, and related areas.")
(define-public avogadro2
(package
(name "avogadro2")
- (version "1.93.0")
+ (version "1.100.0")
(source
(origin
(method git-fetch)
@@ -165,17 +165,47 @@ bioinformatics, materials science, and related areas.")
(url "https://github.com/OpenChemistry/avogadroapp")
(commit version)))
(sha256
- (base32
- "1z3pjlwja778a1dmvx9aqz2hlw5q9g3kqxhm9slz08452600jsv7"))
+ (base32 "19cd5aqvcw6xj0x1kmzmxl0vrnbhk5ymnl9p2p4d9504ma5k6aim"))
(file-name (git-file-name name version))))
(build-system cmake-build-system)
(native-inputs
- (list eigen pkg-config))
- (inputs
- (list avogadrolibs hdf5 molequeue qtbase-5))
+ `(("eigen" ,eigen)
+ ("pkg-config" ,pkg-config)
+ ("avogadro-i18n"
+ ,(origin
+ (method git-fetch)
+ (uri
+ (git-reference
+ (url "https://github.com/openchemistry/avogadro-i18n")
+ (commit "07bee85")))
+ (file-name (git-file-name name
+ version))
+ (sha256
+ (base32
+ "1vhjh0gilmm90269isrkvyzwwh1cj3bwcxls394psadw1a89mk14"))))))
+ (inputs (list avogadrolibs hdf5 molequeue openbabel qtbase-5 qtsvg-5))
;; TODO: Enable tests with "-DENABLE_TESTING" configure flag.
(arguments
- '(#:tests? #f))
+ (list
+ #:tests? #f
+ #:phases
+ #~(modify-phases %standard-phases
+ (add-after 'unpack 'symlink
+ (lambda _
+ (begin
+ (symlink (assoc-ref %build-inputs "avogadro-i18n")
+ "../avogadro-i18n"))))
+ (add-after 'install 'wrap-program
+ (lambda _
+ (wrap-program (string-append #$output "/bin/avogadro2")
+ (list
+ "PATH"
+ 'suffix
+ (list (string-append #$openbabel "/bin")))
+ (list
+ "QT_PLUGIN_PATH"
+ 'suffix
+ (list (string-append #$qtsvg-5 "/lib/qt5/plugins")))))))))
(home-page "https://www.openchemistry.org/projects/avogadro2/")
(synopsis "Advanced molecule editor")
(description