diff options
Diffstat (limited to 'gnu/packages/databases.scm')
| -rw-r--r-- | gnu/packages/databases.scm | 227 |
1 files changed, 177 insertions, 50 deletions
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index f262aaf95b..881047af9d 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -1,6 +1,6 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2012-2016, 2018, 2022 Ludovic Courtès <ludo@gnu.org> -;;; Copyright © 2012, 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr> +;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2025 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2013, 2017 Cyril Roelandt <tipecaml@gmail.com> ;;; Copyright © 2014, 2016 David Thompson <davet@gnu.org> ;;; Copyright © 2014, 2015, 2016, 2018 Mark H Weaver <mhw@netris.org> @@ -115,6 +115,7 @@ #:use-module (gnu packages golang) #:use-module (gnu packages golang-build) #:use-module (gnu packages golang-check) + #:use-module (gnu packages golang-compression) #:use-module (gnu packages golang-crypto) #:use-module (gnu packages golang-web) #:use-module (gnu packages golang-xyz) @@ -147,6 +148,7 @@ #:use-module (gnu packages pkg-config) #:use-module (gnu packages popt) #:use-module (gnu packages pretty-print) + #:use-module (gnu packages prometheus) #:use-module (gnu packages protobuf) #:use-module (gnu packages python) #:use-module (gnu packages python-build) @@ -481,6 +483,113 @@ database later.") license:mpl1.1 ; examples/interfaces/0{6,8}*.cpp license:public-domain)))) ; including files without explicit licence +(define-public go-github-com-cockroachdb-pebble + ;; TODO: As inherited package can't be placed in separate module, keeping + ;; this Golang source library here. + (package + (name "go-github-com-cockroachdb-pebble") + (version "1.1.5") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/cockroachdb/pebble") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "15px3m8fid7fwh0xfyia75aak6a5sx5q3r01n79fr6mnyiaix18a")))) + (build-system go-build-system) + (arguments + (list + #:go go-1.23 + #:build-flags #~(list "-tags" "external_libzstd") + #:test-flags #~(list "-tags" "external_libzstd" + ;; Skip tests requiring git in PATH. + "-skip" "TestLint") + ;; XXX: Maybe run more tests if possible. + #:test-subdirs #~(list "internal/...") + #:import-path "github.com/cockroachdb/pebble")) + (native-inputs + (list go-github-com-stretchr-testify + go-golang-org-x-perf + pkg-config)) + (inputs + (list (list zstd "lib"))) + (propagated-inputs + (list go-github-com-cespare-xxhash-v2 + go-github-com-cockroachdb-datadriven + go-github-com-cockroachdb-errors + go-github-com-cockroachdb-fifo + go-github-com-cockroachdb-redact + go-github-com-cockroachdb-tokenbucket + go-github-com-datadog-zstd + go-github-com-ghemawat-stream + go-github-com-golang-snappy + go-github-com-guptarohit-asciigraph + go-github-com-hdrhistogram-hdrhistogram-go + go-github-com-klauspost-compress + go-github-com-kr-pretty + go-github-com-pkg-errors + go-github-com-pmezard-go-difflib + go-github-com-prometheus-client-golang + go-github-com-prometheus-client-model + go-github-com-spf13-cobra + go-golang-org-x-exp + go-golang-org-x-perf + go-golang-org-x-sync + go-golang-org-x-sys)) + (home-page "https://github.com/cockroachdb/pebble") + (synopsis "RocksDB/LevelDB inspired key-value database in Golang") + (description + "Pebble is a LevelDB/RocksDB inspired key-value store focused on +performance and internal usage by CockroachDB. Pebble inherits the RocksDB +file formats and a few extensions such as range deletion tombstones, +table-level bloom filters, and updates to the MANIFEST format.") + (license license:bsd-3))) + +(define-public go-github-com-cockroachdb-pebble-v2 + (package + (inherit go-github-com-cockroachdb-pebble) + (name "go-github-com-cockroachdb-pebble-v2") + (version "2.0.3") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/cockroachdb/pebble") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1jglnsabg7y0y5agazvvmsa0r0ddn0j3c204cdpv7qsvi90pnr0d")))) + (arguments + (substitute-keyword-arguments + (package-arguments go-github-com-cockroachdb-pebble) + ((#:tests? _ #t) #f) ; TODO: Find out why some tests fails to build + ((#:import-path _) "github.com/cockroachdb/pebble/v2"))) + (propagated-inputs + (modify-inputs (package-propagated-inputs go-github-com-cockroachdb-pebble) + (append go-github-com-cockroachdb-crlib + go-github-com-cockroachdb-swiss))))) + +(define-public pebble + (package/inherit go-github-com-cockroachdb-pebble + (name "pebble") + (arguments + (substitute-keyword-arguments + (package-arguments go-github-com-cockroachdb-pebble) + ((#:tests? _ #t) #f) + ((#:install-source? _ #t) #f) + ((#:import-path _) "github.com/cockroachdb/pebble/cmd/pebble") + ((#:unpack-path _ "") "github.com/cockroachdb/pebble"))) + (native-inputs + (append (package-propagated-inputs go-github-com-cockroachdb-pebble) + (package-native-inputs go-github-com-cockroachdb-pebble))) + (propagated-inputs '()) + (description + (string-append (package-description + go-github-com-cockroachdb-pebble) + "\nThis package provides command line interface (CLI).")))) + (define-public dicedb (package (name "dicedb") @@ -498,7 +607,6 @@ database later.") (build-system go-build-system) (arguments (list - #:go go-1.23 #:install-source? #f #:import-path "github.com/dicedb/dice" #:build-flags @@ -1132,14 +1240,6 @@ Language.") #:parallel-tests? ,(target-x86-64?) #:phases (modify-phases %standard-phases - ;; TODO: Move this patch to the source field. - ,@(if (target-riscv64?) - `((add-after 'unpack 'patch-source - (lambda* (#:key inputs native-inputs #:allow-other-keys) - (invoke "patch" "-p1" "--force" "--input" - (assoc-ref (or native-inputs inputs) - "patch-file"))))) - '()) (add-after 'unpack 'adjust-output-references (lambda _ ;; The build system invariably prepends $CMAKE_INSTALL_PREFIX @@ -1280,12 +1380,8 @@ Language.") (("-lssl -lcrypto" all) (string-append "-L" openssl " " all))))))))) (native-inputs - `(,@(if (target-riscv64?) - `(("patch" ,patch) - ("patch-file" ,(search-patch "mariadb-rocksdb-atomic-linking.patch"))) - `()) - ("bison" ,bison) - ("perl" ,perl))) + `(("bison" ,bison) + ("perl" ,perl))) (inputs (list fmt jemalloc @@ -3694,15 +3790,66 @@ with Python's asyncio framework.") (define-public python-asyncmy (package (name "python-asyncmy") - (version "0.2.5") + (version "0.2.10") (source - (origin - (method url-fetch) - (uri (pypi-uri "asyncmy" version)) - (sha256 - (base32 "0i18zxy6xvzv6dk791xifn2sw2q4zvqwpzrzy8qx51d3mp8z6gng")))) - (build-system python-build-system) - (native-inputs (list python-cython)) + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/long2ice/asyncmy") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "10sqihiwx7vsdaavgl418hhk7d5rl6d1i60y5bjr76mdfny18q55")))) + (build-system pyproject-build-system) + (arguments + (list + ;; XXX: Most tests fail, probably because + ;; of pytest-asyncio version mismatch. + #:tests? #f + #:phases + #~(modify-phases %standard-phases + (add-after 'install 'cleanup + (lambda* (#:key inputs outputs #:allow-other-keys) + (for-each delete-file + (find-files (site-packages inputs outputs) + "\\.(c|pyx)$")))) + + (replace 'check + (lambda* (#:key tests? #:allow-other-keys #:rest rest) + (when tests? + ;; XXX: Else pytest picks up the wrong __init__.py + (delete-file-recursively "asyncmy") + ;; The tests rely on a MySQL or MariaDB test server + ;; being available. + (let ((datadir "/tmp/mysql") + (socket "/tmp/mysql/mysqld.sock") + (username "root") + (password "123456")) ;default in conftest.py + (invoke "mysqld" "--initialize-insecure" + (string-append "--datadir=" datadir)) + (spawn "mysqld" + (list + "mysqld" + ;; Respect '--datadir'. + "--no-defaults" + (string-append "--datadir=" datadir) + (string-append "--socket=" socket))) + (sleep 1) + (invoke "mysql" + (string-append "--socket=" socket) + "-u" "root" + "-e" (string-append + "ALTER USER 'root'@'localhost' IDENTIFIED BY '" + password "';")) + (apply (assoc-ref %standard-phases 'check) + `(#:tests? ,tests? ,@rest))))))))) + (native-inputs + (list mysql + python-cython + python-poetry-core + python-pytest + python-pytest-asyncio + python-setuptools)) (home-page "https://github.com/long2ice/asyncmy") (synopsis "Fast MySQL driver for Python") (description "@code{asyncmy} is a fast @code{asyncio} MySQL driver, which @@ -4016,30 +4163,19 @@ Memory-Mapped Database} (LMDB), a high-performance key-value store.") (define-public virtuoso-ose (package (name "virtuoso-ose") - (version "7.2.11") + (version "7.2.15") (source (origin (method url-fetch) (uri (string-append "mirror://sourceforge/virtuoso/virtuoso/" version "/" "virtuoso-opensource-" version ".tar.gz")) (sha256 - (base32 "0mk25gr1pafmps4nsydjprwswbzwch8b583nlwh7x2031sz7ald1")) - (patches (search-patches "virtuoso-ose-remove-pre-built-jar-files.patch")) + (base32 "1nz6kddwxz5k79g3skj7y45f0l20m8fh8haw42j313xm177xpdp0")) (modules '((guix build utils))) ;; This snippet removes pre-built Java archives. (snippet #~(for-each delete-file-recursively - (list "binsrc/hibernate" - "binsrc/jena" - "binsrc/jena2" - "binsrc/jena3" - "binsrc/jena4" - "binsrc/rdf4j" - "binsrc/sesame" - "binsrc/sesame2" - "binsrc/sesame3" - "binsrc/sesame4" - "libsrc/JDBCDriverType4"))))) + (find-files "." "\\.jar$"))))) (build-system gnu-build-system) (arguments (list @@ -4052,9 +4188,6 @@ Memory-Mapped Database} (LMDB), a high-performance key-value store.") "--enable-static=no") #:phases #~(modify-phases %standard-phases - (replace 'bootstrap - (lambda _ - (invoke "sh" "autogen.sh"))) (add-after 'unpack 'avoid-embedding-kernel-and-timestamps ;; For a reproducible build, avoid embedding the kernel version and ;; timestamps. @@ -4073,15 +4206,9 @@ Memory-Mapped Database} (LMDB), a high-performance key-value store.") "appsrc/ODS-FeedManager/make_vad.sh" "appsrc/ODS-Bookmark/make_vad.sh" "appsrc/ODS-Addressbook/make_vad.sh" - "binsrc/dbpedia/make_vad.sh" "binsrc/samples/demo/make_vad.sh" "binsrc/samples/demo/mkdoc.sh" - "binsrc/samples/sparql_demo/make_vad.sh" - "binsrc/bpel/make_vad.sh" - "binsrc/fct/make_vad.sh" - "binsrc/rdf_mappers/make_vad.sh" - "binsrc/isparql/make_vad.sh" - "binsrc/conductor/mkvad.sh") + "binsrc/rdf_mappers/make_vad.sh") (("^UNAME_SYSTEM=.*") "UNAME_SYSTEM=unknown\n") (("^UNAME_RELEASE=.*") "UNAME_RELEASE=unknown\n") (("^PACKDATE=.*") "PACKDATE=2012-04-18\n") @@ -4096,7 +4223,7 @@ Memory-Mapped Database} (LMDB), a high-performance key-value store.") '("libvirtuoso-t.a" "libvirtuoso-t.la"))))))) (native-inputs - (list autoconf automake bison flex gperf libtool)) + (list autoconf automake bison flex gperf libtool python)) (inputs (list openssl net-tools readline which zlib)) (home-page "https://vos.openlinksw.com/owiki/wiki/VOS/") @@ -5992,7 +6119,7 @@ relational databases are in general.") go-github-com-lib-pq go-github-com-mattn-go-runewidth go-github-com-mattn-go-sqlite3 - go-github-com-olekukonko-tablewriter + go-github-com-olekukonko-tablewriter-0.0.5 go-github-com-pkg-errors go-github-com-sourcegraph-jsonrpc2 go-golang-org-x-crypto |