diff options
Diffstat (limited to 'gnu/packages/jupyter.scm')
| -rw-r--r-- | gnu/packages/jupyter.scm | 98 |
1 files changed, 66 insertions, 32 deletions
diff --git a/gnu/packages/jupyter.scm b/gnu/packages/jupyter.scm index 975366598f..54288238b4 100644 --- a/gnu/packages/jupyter.scm +++ b/gnu/packages/jupyter.scm @@ -1,15 +1,16 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2014 Danny Milosavljevic <dannym@friendly-machines.com> +;;; Copyright © 2015 Federico Beffa <beffa@fbengineering.ch> ;;; Copyright © 2016, 2019 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2016, 2019, 2021-2025 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2016, 2021 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2018 Pierre-Antoine Rouby <pierre-antoine.rouby@inria.fr> ;;; Copyright © 2019, 2021-2023 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2019, 2022 Andreas Enge <andreas@enge.fr> -;;; Copyright © 2021 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2021 Hugo Lecomte <hugo.lecomte@inria.fr> ;;; Copyright © 2021 Lars-Dominik Braun <lars@6xq.net> ;;; Copyright © 2021 Nicolas Goaziou <mail@nicolasgoaziou.fr> -;;; Copyright © 2022 Marius Bakke <marius@gnu.org> +;;; Copyright © 2021, 2022 Marius Bakke <marius@gnu.org> ;;; Copyright © 2022 Maxim Cournoyer <maxim.cournoyer@gmail.com> ;;; Copyright © 2024 Nicolas Graves <ngraves@ngraves.fr> ;;; Copyright © 2024-2025 Sharlatan Hellseher <sharlatanus@gmail.com> @@ -360,26 +361,33 @@ to Jupyter Server for their Python Web application backend.") (define-public python-jupyter-lsp (package (name "python-jupyter-lsp") - (version "2.2.5") + (version "2.3.0") (source (origin (method url-fetch) - (uri (pypi-uri "jupyter-lsp" version)) + (uri (pypi-uri "jupyter_lsp" version)) (sha256 - (base32 "00ahai7wp0m98glpqsrd1bymcllzkb8irvskzl4zhinlbah4fcbr")))) + (base32 "0i825shcn9d3f7a5zmvcj1p87s5wgpqn8cyphjvqz1nw769sb2j5")))) (build-system pyproject-build-system) (arguments (list + ;; tests: 63 passed, 8 skipped, 1 deselected, 20 warnings #:test-flags - ;; No R language server is present. - '(list "-k" "not test_r_package_detection") + ;; Network access is required or most tests failed. + #~(list "--ignore=jupyter_lsp/tests/test_listener.py" + "--ignore=jupyter_lsp/tests/test_session.py" + ;; No R language server is present. + "-k" "not test_r_package_detection") #:phases - '(modify-phases %standard-phases - ;; Some tests require a writable HOME - (add-before 'check 'set-HOME - (lambda _ (setenv "HOME" "/tmp")))))) + #~(modify-phases %standard-phases + ;; Some tests require a writable HOME + (add-before 'check 'set-HOME + (lambda _ (setenv "HOME" "/tmp")))))) + (native-inputs + (list python-pytest + python-pytest-asyncio + python-setuptools)) (propagated-inputs (list python-jupyter-server)) - (native-inputs (list python-pytest python-setuptools python-wheel)) (home-page "https://pypi.org/project/jupyter-lsp/") (synopsis "Multi-Language Server WebSocket proxy for Jupyter Notebook/Lab server") (description @@ -500,6 +508,34 @@ Messaging Protocol}.") extensions.") (license license:bsd-4))) +(define-public python-terminado + (package + (name "python-terminado") + (version "0.18.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "terminado" version)) + (sha256 + (base32 + "0bpxag3n0148vsgmi6wh3ynmprykazzqys0lfxgpdr2xp32g42fy")))) + (build-system pyproject-build-system) + (arguments + (list + #:test-flags #~(list "-W" "default"))) ;taken from pyproject.toml + (native-inputs + (list python-hatchling + python-pytest + python-pytest-timeout)) + (propagated-inputs + (list python-ptyprocess + python-tornado-6)) + (home-page "https://github.com/jupyter/terminado") + (synopsis "Terminals served to term.js using Tornado websockets") + (description "This package provides a Tornado websocket backend for the +term.js Javascript terminal emulator library.") + (license license:bsd-2))) + (define-public xeus (package (name "xeus") @@ -549,7 +585,7 @@ alternative Python kernel for Jupyter.") (define-public python-jupyterlab-pygments (package (name "python-jupyterlab-pygments") - (version "0.1.2") + (version "0.1.2") ;newer versions requires Node.js packages (source (origin (method url-fetch) @@ -557,8 +593,10 @@ alternative Python kernel for Jupyter.") (sha256 (base32 "0ij14mmnc39nmf84i0av6j9glazjic7wzv1qyhr0j5966s3s1kfg")))) - (build-system python-build-system) + (build-system pyproject-build-system) (arguments '(#:tests? #false)) ; there are no tests + (native-inputs + (list python-setuptools)) (propagated-inputs (list python-pygments)) (home-page "https://jupyter.org") @@ -833,15 +871,17 @@ endpoints—to Jupyter web applications.") (define-public python-jupyterlab-widgets (package (name "python-jupyterlab-widgets") - (version "3.0.10") + ;; XXX: Newer version requires python-jupyterlab, see guix/guix#2073. + (version "3.0.11") (source (origin (method url-fetch) (uri (pypi-uri "jupyterlab_widgets" version)) (sha256 - (base32 - "1h04kln8hp56svdjjk2hbsb0z1mby71cv4gss3wy89v7jw2arwh4")))) + (base32 "09zfvqsw0svm6r3i2lhklnx44s7j4i60bvcvkkr9m5iwb5wwcnnx")))) (build-system pyproject-build-system) + (arguments + (list #:tests? #f)) ;no tests in PyPI (native-inputs (list python-jupyter-packaging)) (home-page "https://github.com/jupyter-widgets/ipywidgets") @@ -1071,7 +1111,7 @@ version to the original file.") (define-public repo2docker (package (name "repo2docker") - (version "2024.03.0") + (version "2024.07.0") (source (origin (method git-fetch) (uri (git-reference @@ -1080,7 +1120,7 @@ version to the original file.") (file-name (git-file-name name version)) (sha256 (base32 - "1bcnl91j6p3315lk2mmn02jq6mjsn68m9rcw5rkln4c9fx1160rx")))) + "1fg71bldvfiln8h91sca4bjhwk7vdh80rhf0514qk6vqpikpx4cb")))) (outputs '("out" "doc")) (build-system pyproject-build-system) (arguments @@ -1311,10 +1351,13 @@ datasets across widgets.") (version "2.6.0") (source (origin - (method url-fetch) - (uri (pypi-uri "papermill" version)) + (method git-fetch) + (uri (git-reference + (url "https://github.com/nteract/papermill") + (commit version))) + (file-name (git-file-name name version)) (sha256 - (base32 "097ai2n7f72a7hya9qnds3f28cg70p8xdj2c3cwqymzx28cskqlz")))) + (base32 "1i5zikvl9inficryqfz0v885v24pcs78cj5nzyjw0x232kxbj41p")))) (build-system pyproject-build-system) (arguments (list @@ -1335,27 +1378,18 @@ datasets across widgets.") python-tenacity python-tqdm)) (native-inputs (list python-attrs - python-black python-boto3 python-botocore - python-bumpversion - python-check-manifest - python-codecov - python-coverage python-ipython python-ipywidgets python-moto python-notebook python-pytest - python-pytest-cov python-pytest-env python-pytest-mock python-recommonmark python-requests - python-setuptools - python-tox - python-twine - python-wheel)) + python-setuptools)) (home-page "https://github.com/nteract/papermill") (synopsis "Parameterize and run Jupyter and nteract Notebooks") (description "Papermill is a tool for parameterizing, executing, and |